RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 IFNA2P01563 188 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 CTSBP07858 339 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 GPR89BP0CG08 455 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 PRR35P0CG20 571 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 PVRP15151 417 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 SYT1P21579 422 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 SDC4P31431 198 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 ME1P48163 572 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 MAXP61244 160 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 DCAF7P61962 342 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 TMPRSS15P98073 1019 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 LBRQ14739 615 aaKnown RBP9.04□□□□□ -0.96
NEDD1-211ENST00000557454 ZNF766Q5HY98 468 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 ZNF569Q5MCW4 686 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 SLFN11Q7Z7L1 901 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 CD163Q86VB7 1156 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 GHDCQ8N2G8 530 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 PGBD5Q8N414 524 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 C3orf20Q8ND61 904 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 ANKK1Q8NFD2 765 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 FAM172AQ8WUF8 416 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 RXFP2Q8WXD0 754 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 TSG101Q99816 390 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 MENTQ9BUN1 341 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 KRTAP3-3Q9BYR6 98 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 KRTAP3-2Q9BYR7 98 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 SPRTNQ9H040 489 aaPredicted RBP9.04□□□□□ -0.96
NEDD1-211ENST00000557454 FAM83DQ9H4H8 585 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 TRIM39Q9HCM9 518 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 IMP3Q9NV31 184 aaKnown RBP9.04□□□□□ -0.96
NEDD1-211ENST00000557454 PCDHA7Q9UN72 937 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 MTMR6Q9Y217 621 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 ASB1Q9Y576 335 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 AP1M2Q9Y6Q5 423 aa9.04□□□□□ -0.96
NEDD1-211ENST00000557454 A0A0J9YYE9 177 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 TRIM64A6NGJ6 449 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 TRIM64BA6NI03 449 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 ZSCAN9O15535 394 aaPredicted RBP9.03□□□□□ -0.96
NEDD1-211ENST00000557454 HCRTR1O43613 425 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 ASNA1O43681 348 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 SLC25A14O95258 325 aaPredicted RBP9.03□□□□□ -0.96
NEDD1-211ENST00000557454 TRBC1P01850 177 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 CELA2AP08217 269 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 MTHFD1P11586 935 aaKnown RBP9.03□□□□□ -0.96
NEDD1-211ENST00000557454 HLA-DPA1P20036 260 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 ITGAXP20702 1163 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 SPINT3P49223 89 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 PRKAA1Q13131 559 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 RABEP1Q15276 862 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 NKG7Q16617 165 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 CCDC40Q4G0X9 1142 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 ARSKQ6UWY0 536 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 ENOSF1Q7L5Y1 443 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 ARCQ7LC44 396 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 STRADAQ7RTN6 431 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 SIAH3Q8IW03 269 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 ARHGAP12Q8IWW6 846 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 RPRMLQ8N4K4 120 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 ZNF655Q8N720 491 aaPredicted RBP9.03□□□□□ -0.96
NEDD1-211ENST00000557454 TMEM35BQ8NCS4 154 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 SLC20A1Q8WUM9 679 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 RND1Q92730 232 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 N4BP2L2Q92802 583 aaPredicted RBP9.03□□□□□ -0.96
NEDD1-211ENST00000557454 WNT2BQ93097 391 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 SEC16BQ96JE7 1060 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 SPATA32Q96LK8 384 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 KCTD15Q96SI1 283 aaPredicted RBP9.03□□□□□ -0.96
NEDD1-211ENST00000557454 DEF6Q9H4E7 631 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 BEX4Q9NWD9 120 aaPredicted RBP9.03□□□□□ -0.96
NEDD1-211ENST00000557454 CRIM1Q9NZV1 1036 aa9.03□□□□□ -0.96
NEDD1-211ENST00000557454 ARHGEF9O43307 516 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 ACPPP15309 386 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 VCLP18206 1134 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 CD53P19397 219 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 KIR2DL3P43628 341 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 ARSEP51690 589 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 TPI1P60174 286 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 APBA1Q02410 837 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 IL10RBQ08334 325 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 KHDC1Q4VXA5 237 aaKnown RBP9.02□□□□□ -0.97
NEDD1-211ENST00000557454 ALS2CLQ60I27 953 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 FAM83HQ6ZRV2 1179 aaPredicted RBP9.02□□□□□ -0.97
NEDD1-211ENST00000557454 TRAPPC5Q8IUR0 188 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 NDUFAF2Q8N183 169 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 NPWQ8N729 165 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 MYRIPQ8NFW9 859 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 JOSD2Q8TAC2 188 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 FKBP10Q96AY3 582 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 C8orf44Q96CB5 159 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 VPS50Q96JG6 964 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 FRMD6Q96NE9 622 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 MGME1Q9BQP7 344 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 BDH2Q9BUT1 245 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 SPATA16Q9BXB7 569 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 HES7Q9BYE0 225 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 PITPNM3Q9BZ71 974 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 WDR54Q9H977 334 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 ZFYVE1Q9HBF4 777 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 GDPD2Q9HCC8 539 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 FAM60AQ9NP50 221 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms