RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 TLR10Q9BXR5 811 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 GPR87Q9BY21 358 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 OR52A5Q9H2C5 316 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 SRMSQ9H3Y6 488 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 TP53TG5Q9Y2B4 290 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 MAN2B2Q9Y2E5 1009 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 R3HDM2Q9Y2K5 976 aaKnown RBP13.78□□□□□ -0.2
SNX6-210ENST00000557341 CAPN6Q9Y6Q1 641 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 PCM1Q15154 2024 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 PIPSLA2A3N6 862 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 QSOX1O00391 747 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 RFPL1O75677 317 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 PRSS56P0CW18 603 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 TPH1P17752 444 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 MSNP26038 577 aaKnown RBP13.77□□□□□ -0.21
SNX6-210ENST00000557341 PTPN4P29074 926 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 CD151P48509 253 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 RPS15P62841 145 aaKnown RBP13.77□□□□□ -0.21
SNX6-210ENST00000557341 DBN1Q16643 649 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 ZNF658BQ4V348 819 aaPredicted RBP13.77□□□□□ -0.21
SNX6-210ENST00000557341 FBXO38Q6PIJ6 1188 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 SYVN1Q86TM6 617 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 LINC00523Q86TU6 105 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 TMEM135Q86UB9 458 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 CLDN19Q8N6F1 224 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 CDKN2AIPNLQ96HQ2 116 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 HES6Q96HZ4 224 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 PPM1MQ96MI6 270 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 HGH1Q9BTY7 390 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 MVB12BQ9H7P6 319 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 KCND1Q9NSA2 647 aa13.77□□□□□ -0.21
SNX6-210ENST00000557341 PIH1D1Q9NWS0 290 aaKnown RBP13.77□□□□□ -0.21
SNX6-210ENST00000557341 NBASA2RRP1 2371 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 TCRBV7S2A1N4TA0A589 114 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 CCDC78A2IDD5 438 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 SLC9B1P1A6NJY1 282 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 ERI2A8K979 691 aaKnown RBP13.76□□□□□ -0.21
SNX6-210ENST00000557341 BTN3A1O00481 513 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 MAP3K7O43318 606 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 AP2A2O94973 939 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 GAS8O95995 478 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 FTH1P02794 183 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 PDHA2P29803 388 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 NSG1P42857 185 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 PREPP48147 710 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 GSDMDP57764 484 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 RPS18P62269 152 aaKnown RBP13.76□□□□□ -0.21
SNX6-210ENST00000557341 GPS2Q13227 327 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 BOP1Q14137 746 aaKnown RBP13.76□□□□□ -0.21
SNX6-210ENST00000557341 ITIH4Q14624 930 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 UGT8Q16880 541 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 SEL1L2Q5TEA6 688 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 FAM199XQ6PEV8 388 aaPredicted RBP13.76□□□□□ -0.21
SNX6-210ENST00000557341 PACS1Q6VY07 963 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 MICALCLQ6ZW33 695 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 PIANPQ8IYJ0 282 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 TAB3Q8N5C8 712 aaPredicted RBP13.76□□□□□ -0.21
SNX6-210ENST00000557341 OR52E1Q8NGJ3 308 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 CPT1BQ92523 772 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 MR1Q95460 341 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.76□□□□□ -0.213e-7■■■■■ 43.2
SNX6-210ENST00000557341 LRFN5Q96NI6 719 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 RUFY1Q96T51 708 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 PITPNM3Q9BZ71 974 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 TFB2MQ9H5Q4 396 aaKnown RBP13.76□□□□□ -0.21
SNX6-210ENST00000557341 SYTL2Q9HCH5 934 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 SMARCAL1Q9NZC9 954 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 IMPACTQ9P2X3 320 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 DOPEY2Q9Y3R5 2298 aa13.76□□□□□ -0.21
SNX6-210ENST00000557341 SEC16AO15027 2179 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 PRRC2CQ9Y520 2896 aaKnown RBP13.75□□□□□ -0.21
SNX6-210ENST00000557341 A0A0U1RQJ8 604 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 MROH6A6NGR9 719 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 C2orf74A8MZ97 194 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 LIN7AO14910 233 aaPredicted RBP13.75□□□□□ -0.21
SNX6-210ENST00000557341 ARHGAP6O43182 974 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 KLK3P07288 261 aaPredicted RBP13.75□□□□□ -0.21
SNX6-210ENST00000557341 MSL3P1P0C860 447 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 ST6GAL1P15907 406 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 NR1D1P20393 614 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 PRDX3P30048 256 aaKnown RBP13.75□□□□□ -0.21
SNX6-210ENST00000557341 CDH17Q12864 832 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 KLRB1Q12918 225 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 ABRQ12979 859 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 SYTL3Q4VX76 610 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 IZUMO3Q5VZ72 239 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 TCTN3Q6NUS6 607 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 ZNF517Q6ZMY9 492 aaPredicted RBP13.75□□□□□ -0.21
SNX6-210ENST00000557341 AMIGO1Q86WK6 493 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 APLFQ8IW19 511 aaPredicted RBP13.75□□□□□ -0.21
SNX6-210ENST00000557341 DNAAF3Q8N9W5 541 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 OR52K1Q8NGK4 314 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 THAP4Q8WY91 577 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 ATG4AQ8WYN0 398 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 TFGQ92734 400 aaPredicted RBP13.75□□□□□ -0.21
SNX6-210ENST00000557341 CLIP3Q96DZ5 547 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 FRMD8P1Q9BZ68 369 aaPredicted RBP13.75□□□□□ -0.21
SNX6-210ENST00000557341 AKIRIN1Q9H9L7 192 aaPredicted RBP13.75□□□□□ -0.21
SNX6-210ENST00000557341 ANKRD12Q6UB98 2062 aa13.75□□□□□ -0.21
SNX6-210ENST00000557341 LRRK2Q5S007 2527 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms