RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 CRYMQ14894 314 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 TMED2Q15363 201 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 HSP90AA5PQ58FG0 334 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 TMEM164Q5U3C3 297 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 DUPD1Q68J44 220 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 ZNF470Q6ECI4 717 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 ARMC6Q6NXE6 501 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 DUS1LQ6P1R4 473 aaKnown RBP10.41□□□□□ -0.74
LINC00239-201ENST00000556973 OTOAQ7RTW8 1153 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 CLEC14AQ86T13 490 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 KCNMB4Q86W47 210 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 IGDCC3Q8IVU1 814 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 TBC1D21Q8IYX1 336 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 SLC22A15Q8IZD6 547 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 OR4E2Q8NGC2 313 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 OR5K2Q8NHB8 316 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 KIF18AQ8NI77 898 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 RSC1A1Q92681 617 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 PWWP2AQ96N64 755 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 TGM7Q96PF1 710 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 FAM167BQ9BTA0 163 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 RAB17Q9H0T7 212 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 DPH5Q9H2P9 285 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 TRIT1Q9H3H1 467 aaKnown RBP10.41□□□□□ -0.74
LINC00239-201ENST00000556973 HRASLS2Q9NWW9 162 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 ZC3H7BQ9UGR2 993 aaKnown RBP10.41□□□□□ -0.74
LINC00239-201ENST00000556973 KLHL3Q9UH77 587 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 CDYLQ9Y232 598 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 ASF1AQ9Y294 204 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 COMMD10Q9Y6G5 202 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 NCOR2Q9Y618 2525 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 KIF26BQ2KJY2 2108 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 AKAP13Q12802 2813 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 KNTC1P50748 2209 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 OR6C74A6NCV1 312 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 OR5K3A6NET4 321 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 E7ESA3 106 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 MATN2O00339 956 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 RRP8O43159 456 aaKnown RBP10.4□□□□□ -0.74
LINC00239-201ENST00000556973 TLX3O43711 291 aaPredicted RBP10.4□□□□□ -0.74
LINC00239-201ENST00000556973 KDM1AO60341 852 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 BANF1O75531 89 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 FGF3P11487 239 aaPredicted RBP10.4□□□□□ -0.74
LINC00239-201ENST00000556973 ITIH1P19827 911 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 EIF2S3P41091 472 aaKnown RBP10.4□□□□□ -0.74
LINC00239-201ENST00000556973 SLC1A2P43004 574 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 LEPRP48357 1165 aaKnown RBP10.4□□□□□ -0.74
LINC00239-201ENST00000556973 CSE1LP55060 971 aaKnown RBP10.4□□□□□ -0.74
LINC00239-201ENST00000556973 CAV1Q03135 178 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 PDIA2Q13087 525 aaKnown RBP10.4□□□□□ -0.74
LINC00239-201ENST00000556973 PRKG2Q13237 762 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 CTSL3PQ5NE16 218 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 HP1BP3Q5SSJ5 553 aaPredicted RBP10.4□□□□□ -0.74
LINC00239-201ENST00000556973 PLEKHS1Q5SXH7 462 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 OOSP2Q86WS3 158 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 DENND6AQ8IWF6 608 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 SNIP1Q8TAD8 396 aaKnown RBP10.4□□□□□ -0.74
LINC00239-201ENST00000556973 GSDMBQ8TAX9 411 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 LKAAEAR1Q8TD35 194 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 LCN9Q8WX39 176 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 CERS2Q96G23 380 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 TAAR9Q96RI9 348 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 CD180Q99467 661 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 CCDC68Q9H2F9 335 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 SRMSQ9H3Y6 488 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 IARS2Q9NSE4 1012 aaKnown RBP10.4□□□□□ -0.74
LINC00239-201ENST00000556973 SEMA5BQ9P283 1151 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 PISDQ9UG56 409 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 FBXO5Q9UKT4 447 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 CHMP2BQ9UQN3 213 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 RAXQ9Y2V3 346 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 PCDHGA7Q9Y5G6 932 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 MRFAP1Q9Y605 127 aa10.4□□□□□ -0.74
LINC00239-201ENST00000556973 A0A087WV48 116 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 PMS2P1A4D2B8 440 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 B4E171 279 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 E5RI56 91 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 AGRPO00253 132 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 EIF3HO15372 352 aaKnown RBP eCLIP10.39□□□□□ -0.75
LINC00239-201ENST00000556973 RASSF9O75901 435 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 HAUS5O94927 633 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 RPN2P04844 631 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 ERVK-10P10266 1014 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 CCL4P13236 92 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 SLC5A2P31639 672 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 SHMT2P34897 504 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 TSPAN7P41732 249 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 MAPK10P53779 464 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 GFERP55789 205 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 PCBP4P57723 403 aaKnown RBP10.39□□□□□ -0.75
LINC00239-201ENST00000556973 MC2RQ01718 297 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 ABRQ12979 859 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 PRKAA1Q13131 559 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 FRG1Q14331 258 aaKnown RBP10.39□□□□□ -0.75
LINC00239-201ENST00000556973 ZNF789Q5FWF6 425 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 CACHD1Q5VU97 1274 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 IRGCQ6NXR0 463 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 TTC23LQ6PF05 361 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 UNC5DQ6UXZ4 953 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 UNC5AQ6ZN44 842 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms