RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PMS2P54278 862 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 GDF10P55107 478 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 RPS18P62269 152 aaKnown RBP21.96■■□□□ 1.11
ACTN1-220ENST00000556433 CACNG1Q06432 222 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 KLRB1Q12918 225 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 KLF1Q13351 362 aaPredicted RBP21.96■■□□□ 1.11
ACTN1-220ENST00000556433 IGFBP7Q16270 282 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 P3H1Q32P28 736 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 ZNF658BQ4V348 819 aaPredicted RBP21.96■■□□□ 1.11
ACTN1-220ENST00000556433 COLEC12Q5KU26 742 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 TCTN3Q6NUS6 607 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 PIANPQ8IYJ0 282 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 CLDN19Q8N6F1 224 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 STYXQ8WUJ0 223 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 SEC14L1Q92503 715 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 TMEM121Q9BTD3 319 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 TLR10Q9BXR5 811 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 FANCEQ9HB96 536 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 LATS2Q9NRM7 1088 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 PIH1D1Q9NWS0 290 aaKnown RBP21.96■■□□□ 1.11
ACTN1-220ENST00000556433 TLK1Q9UKI8 766 aa21.96■■□□□ 1.11
ACTN1-220ENST00000556433 BTN3A3O00478 584 aa21.95■■□□□ 1.1
ACTN1-220ENST00000556433 KLK3P07288 261 aaPredicted RBP21.95■■□□□ 1.1
ACTN1-220ENST00000556433 PREPP48147 710 aa21.95■■□□□ 1.1
ACTN1-220ENST00000556433 GPS2Q13227 327 aa21.95■■□□□ 1.1
ACTN1-220ENST00000556433 TXLNBQ8N3L3 684 aa21.95■■□□□ 1.1
ACTN1-220ENST00000556433 SLC38A9Q8NBW4 561 aa21.95■■□□□ 1.1
ACTN1-220ENST00000556433 SLC35B2Q8TB61 432 aa21.95■■□□□ 1.1
ACTN1-220ENST00000556433 NRTNQ99748 197 aa21.95■■□□□ 1.1
ACTN1-220ENST00000556433 TFB2MQ9H5Q4 396 aaKnown RBP21.95■■□□□ 1.1
ACTN1-220ENST00000556433 MVB12BQ9H7P6 319 aa21.95■■□□□ 1.1
ACTN1-220ENST00000556433 SMARCAL1Q9NZC9 954 aa21.95■■□□□ 1.1
ACTN1-220ENST00000556433 A0A0U1RQJ8 604 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 TCRBV7S2A1N4TA0A589 114 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 BTN3A1O00481 513 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 AP2A1O95782 977 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 FOXK1P85037 733 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 RPA4Q13156 261 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 PRKG2Q13237 762 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 SEMA5AQ13591 1074 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 DBN1Q16643 649 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 UGT8Q16880 541 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 PRAMEF17Q5VTA0 474 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 ASB18Q6ZVZ8 466 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 SYVN1Q86TM6 617 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 APLFQ8IW19 511 aaPredicted RBP21.94■■□□□ 1.1
ACTN1-220ENST00000556433 TEX19Q8NA77 164 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 OR52E1Q8NGJ3 308 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 THAP4Q8WY91 577 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 CPT1BQ92523 772 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 TFGQ92734 400 aaPredicted RBP21.94■■□□□ 1.1
ACTN1-220ENST00000556433 DESI2Q9BSY9 194 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 CHST8Q9H2A9 424 aa21.94■■□□□ 1.1
ACTN1-220ENST00000556433 CCDC78A2IDD5 438 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 NBASA2RRP1 2371 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 MAP3K7O43318 606 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 AP2A2O94973 939 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 GSTM1P09488 218 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 GSDMDP57764 484 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 GSTM4Q03013 218 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 PLEKHS1Q5SXH7 462 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 AMIGO1Q86WK6 493 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 TMEM139Q8IV31 216 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 CLIP3Q96DZ5 547 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 LRFN5Q96NI6 719 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 HGH1Q9BTY7 390 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 XKR8Q9H6D3 395 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 SYTL2Q9HCH5 934 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 PRSS21Q9Y6M0 314 aa21.93■■□□□ 1.1
ACTN1-220ENST00000556433 MROH6A6NGR9 719 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 TMEM150CB9EJG8 249 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 MEN1O00255 615 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 DNAJB5O75953 348 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 ST6GAL1P15907 406 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 ABRQ12979 859 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 BOP1Q14137 746 aaKnown RBP21.92■■□□□ 1.1
ACTN1-220ENST00000556433 IZUMO3Q5VZ72 239 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 ZNF517Q6ZMY9 492 aaPredicted RBP21.92■■□□□ 1.1
ACTN1-220ENST00000556433 LINC00523Q86TU6 105 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 OR52K1Q8NGK4 314 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 OR1L3Q8NH93 324 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 HES6Q96HZ4 224 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 TRIM55Q9BYV6 548 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 PITPNM3Q9BZ71 974 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 KLHL25Q9H0H3 589 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 SERTAD3Q9UJW9 196 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 SPTBP11277 2137 aa21.92■■□□□ 1.1
ACTN1-220ENST00000556433 HECTD1Q9ULT8 2610 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 OR51F1A6NGY5 319 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 C2orf74A8MZ97 194 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 PVRP15151 417 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 PSMA3P25788 255 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 MSNP26038 577 aaKnown RBP21.91■■□□□ 1.1
ACTN1-220ENST00000556433 NSG1P42857 185 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 LMAN1P49257 510 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 IL10RAQ13651 578 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 LAMB3Q13751 1172 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 ITIH4Q14624 930 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 CCDC38Q502W7 563 aa21.91■■□□□ 1.1
ACTN1-220ENST00000556433 LCN10Q6JVE6 187 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms