RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SLC23A2Q9UGH3 650 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 APOBEC3BQ9UH17 382 aaKnown RBP9.02□□□□□ -0.97
ACTN1-218ENST00000556343 POLG2Q9UHN1 485 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 LNPEPQ9UIQ6 1025 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 PILRBQ9UKJ0 227 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 PRKAB1Q9Y478 270 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 OARD1Q9Y530 152 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 TNPO3Q9Y5L0 923 aaKnown RBP9.02□□□□□ -0.97
ACTN1-218ENST00000556343 PLXNA2O75051 1894 aa9.02□□□□□ -0.97
ACTN1-218ENST00000556343 CACNA1IQ9P0X4 2223 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 ZDBF2Q9HCK1 2354 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 WDR91A4D1P6 747 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 NPEPPSL1A6NEC2 478 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 FAM86C2PA6NEL3 165 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 NEMP2A6NFY4 417 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 GFYI3L273 518 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 CDC7O00311 574 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 TRIM13O60858 407 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 MATN4O95460 622 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 TSPAN12O95859 305 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 DHRS4L1P0CG22 281 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 NME1P15531 152 aaKnown RBP9.01□□□□□ -0.97
ACTN1-218ENST00000556343 GRK2P25098 689 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 ALDH3A1P30838 453 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 HSD17B2P37059 387 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 ACTR1BP42025 376 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 ETV4P43268 484 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 PREPP48147 710 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 HNMTP50135 292 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 ALDH18A1P54886 795 aaKnown RBP9.01□□□□□ -0.97
ACTN1-218ENST00000556343 DNAJB13P59910 316 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 ACTR1AP61163 376 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 CDKL1Q00532 357 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 CTBSQ01459 385 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 EIF2B5Q13144 721 aaKnown RBP9.01□□□□□ -0.97
ACTN1-218ENST00000556343 SRSF5Q13243 272 aaKnown RBP9.01□□□□□ -0.97
ACTN1-218ENST00000556343 BIRC2Q13490 618 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 TSNQ15631 228 aaKnown RBP9.01□□□□□ -0.97
ACTN1-218ENST00000556343 UAP1L1Q3KQV9 507 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 METTL2BQ6P1Q9 378 aaKnown RBP9.01□□□□□ -0.97
ACTN1-218ENST00000556343 PDZD3Q86UT5 571 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 TBC1D21Q8IYX1 336 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 KIRREL3Q8IZU9 778 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 SLC22A18ASQ8N1D0 253 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 FBXO39Q8N4B4 442 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 FBXO15Q8NCQ5 510 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-218ENST00000556343 C1orf216Q8TAB5 229 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 MDM1Q8TC05 714 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 PPP4R1Q8TF05 950 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 TFGQ92734 400 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-218ENST00000556343 PDXPQ96GD0 296 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 MAGEB18Q96M61 343 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 FERD3LQ96RJ6 166 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 EGFL8Q99944 293 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 TMEM168Q9H0V1 697 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 ZNF106Q9H2Y7 1883 aaKnown RBP9.01□□□□□ -0.97
ACTN1-218ENST00000556343 STN1Q9H668 368 aaKnown RBP9.01□□□□□ -0.97
ACTN1-218ENST00000556343 EML4Q9HC35 981 aaKnown RBP9.01□□□□□ -0.97
ACTN1-218ENST00000556343 ZNF358Q9NW07 568 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 ARL15Q9NXU5 204 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 TSR3Q9UJK0 312 aaKnown RBP9.01□□□□□ -0.97
ACTN1-218ENST00000556343 CDYLQ9Y232 598 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 KCNK6Q9Y257 313 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 ASF1AQ9Y294 204 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 PCDHGA5Q9Y5G8 931 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 SCN8AQ9UQD0 1980 aa9.01□□□□□ -0.97
ACTN1-218ENST00000556343 KIR2DS5A0A0G2JLQ3 304 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 A0A0G2JNG1 304 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 A0A1B0GVT2 93 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 STX16-NPEPL1H3BU86 382 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 KIR2DS3K7RE56 304 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 TK2O00142 265 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 STX16O14662 325 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 GIPC1O14908 333 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 FFAR2O15552 330 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 PSIP1O75475 530 aaKnown RBP9□□□□□ -0.97
ACTN1-218ENST00000556343 IPO13O94829 963 aaKnown RBP9□□□□□ -0.97
ACTN1-218ENST00000556343 FUCA1P04066 466 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 WNT1P04628 370 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 CFIP05156 583 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 ANXA6P08133 673 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 PDHA2P29803 388 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 SERPINB5P36952 375 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 PGGT1BP53609 377 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 WDR4P57081 412 aaKnown RBP9□□□□□ -0.97
ACTN1-218ENST00000556343 NFKB2Q00653 900 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 STX3Q13277 289 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 MPP2Q14168 576 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 KIR2DS5Q14953 304 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 TGFBIQ15582 683 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 OR4D1Q15615 310 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 ZNF658BQ4V348 819 aaPredicted RBP9□□□□□ -0.97
ACTN1-218ENST00000556343 PRRT3Q5FWE3 981 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 PEAR1Q5VY43 1037 aaPredicted RBP9□□□□□ -0.97
ACTN1-218ENST00000556343 LIPMQ5VYY2 423 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 CAPRIN2Q6IMN6 1127 aaKnown RBP9□□□□□ -0.97
ACTN1-218ENST00000556343 SLC30A9Q6PML9 568 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 ABRAXAS1Q6UWZ7 409 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 C10orf107Q8IVU9 208 aa9□□□□□ -0.97
ACTN1-218ENST00000556343 DCUN1D3Q8IWE4 304 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms