RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 KLF11O14901 512 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 EPHB6O15197 1021 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 KCNJ13O60928 360 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 GJB1P08034 283 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 MARCKSL1P49006 195 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 GBE1Q04446 702 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 VITQ6UXI7 678 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 PARGQ86W56 976 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 CMASQ8NFW8 434 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-216ENST00000556083 CLEC4DQ8WXI8 215 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 EXOC2Q96KP1 924 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 MAP10Q9P2G4 905 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 CDH22Q9UJ99 828 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 TMEM5Q9Y2B1 443 aa10.56□□□□□ -0.72
ACTN1-216ENST00000556083 A0A0U1RQF3 1178 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 FAM240BA0A1B0GVZ2 78 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 SASH3O75995 380 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 ANGPTL1O95841 491 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 IMPDH1P20839 514 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 DUSP3P51452 185 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 ARL13AQ5H913 290 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 THOC7Q6I9Y2 204 aaKnown RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 CFAP206Q8IYR0 622 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 COX18Q8N8Q8 333 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 RAB2BQ8WUD1 216 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 CLIP3Q96DZ5 547 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 FBXL18Q96ME1 805 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 NEDD4LQ96PU5 975 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 MRPS30Q9NP92 439 aaKnown RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 MRPS7Q9Y2R9 242 aaKnown RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 A0A1W2PQ45 241 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 A0A1W2PQY0 241 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 OR5K4A6NMS3 321 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 PRR5-ARHGAP8B1AHC4 643 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 RCBTB2O95199 551 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 NADKO95544 446 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 OAS1P00973 400 aaKnown RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 GSSP48637 474 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 CLCN7P51798 805 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 ARHGAP8P85298 464 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 IL18R1Q13478 541 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 SERINC3Q13530 473 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 TUBA3CQ13748 450 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 EIF5AL1Q6IS14 154 aaKnown RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 TNS4Q8IZW8 715 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 KBTBD7Q8WVZ9 684 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 NXNL1Q96CM4 212 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 ZBTB10Q96DT7 871 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 LRRC46Q96FV0 321 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 FAM83CQ9BQN1 747 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 WDR26Q9H7D7 661 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 SCML2Q9UQR0 700 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 IDH3BO43837 385 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 NME6O75414 186 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 ALPPP05187 535 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 ARRB1P49407 418 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 CDH13P55290 713 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 ECT2LQ008S8 904 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 AAK1Q2M2I8 961 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 TIGD5Q53EQ6 642 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 ZNF776Q68DI1 518 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 TMEM220Q6QAJ8 160 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 DAW1Q8N136 415 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 CCDC107Q8WV48 283 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 NUS1Q96E22 293 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 DUSP26Q9BV47 211 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 CST11Q9H112 138 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 ITGA10O75578 1167 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 RASGRP1O95267 797 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 GOT2P00505 430 aaKnown RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 C8BP07358 591 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 UNGP13051 313 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 SMPD1P17405 629 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 ITIH1P19827 911 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 SLC6A4P31645 630 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 CLCNKBP51801 687 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 CCNIQ14094 377 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 GDPD4Q6W3E5 623 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 CMC1Q7Z7K0 106 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 LRRTM4Q86VH4 590 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 HEATR4Q86WZ0 1026 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 RAB43Q86YS6 212 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 IRF2BP1Q8IU81 584 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 TMEM126BQ8IUX1 230 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 OR56A1Q8NGH5 318 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 OR2AJ1Q8NGZ0 328 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 CNDP2Q96KP4 475 aaKnown RBP10.55□□□□□ -0.72
ACTN1-216ENST00000556083 SMOC2Q9H3U7 446 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 NMUR1Q9HB89 426 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 PNPOQ9NVS9 261 aa10.55□□□□□ -0.72
ACTN1-216ENST00000556083 OR1F1O43749 312 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 ITPKAP23677 461 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 VIPR1P32241 457 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 UGT1A3P35503 534 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 HERVK_113P63132 956 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 TCEAL1Q15170 157 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 SLC10A6Q3KNW5 377 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 CCDC54Q8NEL0 328 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms