RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 FAM96AQ9H5X1 160 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 FAM60AQ9NP50 221 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SOHLH2Q9NX45 425 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SNX7Q9UNH6 387 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TFR2Q9UP52 801 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ZNF451Q9Y4E5 1061 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TRBV5-4A0A0C4DH59 114 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 KLHL33A6NCF5 533 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TMEM150CB9EJG8 249 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CCL22O00626 93 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ZNF185O15231 689 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 KRT86O43790 486 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CLDN1O95832 211 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 KLK3P07288 261 aaPredicted RBP13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SLC35G4P0C7Q5 338 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PRSS56P0CW18 603 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TPBGLP0DKB5 382 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 COL8A1P27658 744 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 LMAN1P49257 510 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 FOXL2P58012 376 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PDE1BQ01064 536 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 NCF4Q15080 339 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PLEKHN1Q494U1 663 aaPredicted RBP13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TMTC4Q5T4D3 741 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 BBS12Q6ZW61 710 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 BZW1Q7L1Q6 419 aaKnown RBP13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 VSTM4Q8IW00 320 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 NXPE1Q8N323 547 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ACVR1CQ8NER5 493 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 HM13Q8TCT9 377 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 INPP5DQ92835 1189 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 RANBP9Q96S59 729 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 KLHL25Q9H0H3 589 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 DEF6Q9H4E7 631 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 COG4Q9H9E3 785 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ACTR5Q9H9F9 607 aaPredicted RBP13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CUEDC1Q9NWM3 386 aaPredicted RBP13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 RSPH14Q9UHP6 348 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TRHDEQ9UKU6 1024 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 INTUQ9ULD6 942 aa13.92□□□□□ -0.18
CHMP4BP1-201ENST00000556017 C17orf113A0A1B0GUU1 675 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 A1L4Q6 167 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 A6NL46 340 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 HACD1B0YJ81 288 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 GOLGA6L19H0YKK7 550 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 MASP2O00187 686 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 LDB2O43679 373 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SPOPO43791 374 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CBX6O95503 412 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CDH3P22223 829 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PREPP48147 710 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TMEM102Q8N9M5 508 aaPredicted RBP13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PHC3Q8NDX5 983 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 OR52E1Q8NGJ3 308 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PNPLA2Q96AD5 504 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CLIP3Q96DZ5 547 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CCM2Q9BSQ5 444 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TFB2MQ9H5Q4 396 aaKnown RBP13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 XKR8Q9H6D3 395 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ERRFI1Q9UJM3 462 aaPredicted RBP13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 COLEC10Q9Y6Z7 277 aa13.91□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CROCCQ5TZA2 2017 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CNTRLQ7Z7A1 2325 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CCDC66A2RUB6 948 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 C5orf60A6NFR6 353 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 APOC4-APOC2K7ER74 178 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ZNF749O43361 778 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 DPM1O60762 260 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 LDLRP01130 860 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 APOC2P02655 101 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CBSLP0DN79 551 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PYGMP11217 842 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ATP1B2P14415 290 aaPredicted RBP13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PSMB4P28070 264 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 NDUFS1P28331 727 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CBSP35520 551 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TBX2Q13207 712 aaPredicted RBP13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 RAPSNQ13702 412 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 BOP1Q14137 746 aaKnown RBP13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ZNF787Q6DD87 383 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ARMC6Q6NXE6 501 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 MED25Q71SY5 747 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PIANPQ8IYJ0 282 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 LCN9Q8WX39 176 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SNRNP40Q96DI7 357 aaKnown RBP13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CCDC42Q96M95 316 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 BARD1Q99728 777 aaKnown RBP13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 HEMGNQ9BXL5 484 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 FSD1LQ9BXM9 530 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SRMSQ9H3Y6 488 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ARNT2Q9HBZ2 717 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ZBTB20Q9HC78 741 aaPredicted RBP13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SYTL2Q9HCH5 934 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 GPR83Q9NYM4 423 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ICKQ9UPZ9 632 aa13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 DIDO1Q9BTC0 2240 aaKnown RBP13.9□□□□□ -0.18
CHMP4BP1-201ENST00000556017 GSAPA4D1B5 854 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 C2orf81A6NN90 581 aa13.89□□□□□ -0.19
CHMP4BP1-201ENST00000556017 MATN2O00339 956 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms