RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 C8GP07360 202 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 GSTA1P08263 222 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 PYGBP11216 843 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 BRAFP15056 766 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 XRCC1P18887 633 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-221ENST00000555773 KRT4P19013 534 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 NDUFS1P28331 727 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 CCNFP41002 786 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 PGGT1BP53609 377 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 SLC18A2Q05940 514 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 ABRQ12979 859 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 ZNF460Q14592 562 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 CLCA4Q14CN2 919 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 ACAP2Q15057 778 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 SF3A2Q15428 464 aaKnown RBP12.18□□□□□ -0.46
SHMT2-221ENST00000555773 RPE65Q16518 533 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 TSNAXIP1Q2TAA8 658 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 KLC3Q6P597 504 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 TTC23LQ6PF05 361 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 MAGEC3Q8TD91 643 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 SKA2Q8WVK7 121 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-221ENST00000555773 TSNARE1Q96NA8 513 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 INSM2Q96T92 566 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-221ENST00000555773 CENPHQ9H3R5 247 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 MVB12BQ9H7P6 319 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 NCKIPSDQ9NZQ3 722 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 PSMD13Q9UNM6 376 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 RUVBL2Q9Y230 463 aaKnown RBP12.18□□□□□ -0.46
SHMT2-221ENST00000555773 COLEC10Q9Y6Z7 277 aa12.18□□□□□ -0.46
SHMT2-221ENST00000555773 VPS13AQ96RL7 3174 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 TNRC6BQ9UPQ9 1833 aaKnown RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 CDX4O14627 284 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 ZBTB14O43829 449 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 PSIP1O75475 530 aaKnown RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 GIMD1P0DJR0 217 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 CD1DP15813 335 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 CRHR1P34998 444 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 KPNA2P52292 529 aaKnown RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 IL9RQ01113 521 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 SP140Q13342 867 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 CSHL1Q14406 222 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 TCEA2Q15560 299 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 SEPT7Q16181 437 aaKnown RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 DEFB133Q30KQ1 61 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 INAVAQ3KP66 663 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 AGBL2Q5U5Z8 902 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 PRR23CQ6ZRP0 262 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 PIWIL4Q7Z3Z4 852 aaKnown RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 CLEC14AQ86T13 490 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 SLC9B2Q86UD5 537 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 C17orf82Q86X59 251 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 GATAD2AQ86YP4 633 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 RASGRP3Q8IV61 690 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 RBM12BQ8IXT5 1001 aaKnown RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 TBC1D21Q8IYX1 336 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 NAGSQ8N159 534 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 SFRP1Q8N474 314 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 FAM181AQ8N9Y4 354 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 FBXO15Q8NCQ5 510 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 OR2I1PQ8NGU4 316 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 OR4C6Q8NH72 309 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 STAG3L4Q8TBR4 150 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 KIAA1191Q96A73 305 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 NXNL1Q96CM4 212 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 CXorf40BQ96DE9 158 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 RMDN2Q96LZ7 410 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 C12orf66Q96MD2 445 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 SMC6Q96SB8 1091 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 SH3GL2Q99962 352 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 SLC12A9Q9BXP2 914 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 TRIM54Q9BYV2 358 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 TFB2MQ9H5Q4 396 aaKnown RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 CAAP1Q9H8G2 361 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 SSU72Q9NP77 194 aaKnown RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 PARD6AQ9NPB6 346 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 TMEM9BQ9NQ34 198 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 IGSF5Q9NSI5 407 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 POT1Q9NUX5 634 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 SCHIP1Q9P0W5 487 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 POLG2Q9UHN1 485 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 GRID1Q9ULK0 1009 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 NOVA2Q9UNW9 492 aaKnown RBP12.17□□□□□ -0.46
SHMT2-221ENST00000555773 ASF1AQ9Y294 204 aa12.17□□□□□ -0.46
SHMT2-221ENST00000555773 RIF1Q5UIP0 2472 aaKnown RBP12.16□□□□□ -0.46
SHMT2-221ENST00000555773 GOLGA8RI6L899 631 aa12.16□□□□□ -0.46
SHMT2-221ENST00000555773 COPEO14579 308 aa12.16□□□□□ -0.46
SHMT2-221ENST00000555773 KDM1AO60341 852 aa12.16□□□□□ -0.46
SHMT2-221ENST00000555773 EML2O95834 649 aa12.16□□□□□ -0.46
SHMT2-221ENST00000555773 VIPP01282 170 aa12.16□□□□□ -0.46
SHMT2-221ENST00000555773 CATP04040 527 aaKnown RBP12.16□□□□□ -0.46
SHMT2-221ENST00000555773 ENO2P09104 434 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-221ENST00000555773 RBP1P09455 135 aa12.16□□□□□ -0.46
SHMT2-221ENST00000555773 MTHFD1P11586 935 aaKnown RBP12.16□□□□□ -0.46
SHMT2-221ENST00000555773 MAP4P27816 1152 aaKnown RBP12.16□□□□□ -0.46
SHMT2-221ENST00000555773 SLC19A1P41440 591 aa12.16□□□□□ -0.46
SHMT2-221ENST00000555773 GRK6P43250 576 aa12.16□□□□□ -0.46
SHMT2-221ENST00000555773 RPIAP49247 311 aa12.16□□□□□ -0.46
SHMT2-221ENST00000555773 DLG1Q12959 904 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms