RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 RPS18P62269 152 aaKnown RBP10.53□□□□□ -0.72
TDP1-212ENST00000555565 TMPRSS15P98073 1019 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 PDE1BQ01064 536 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 IL10RAQ13651 578 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 SPARCL1Q14515 664 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 KCNAB1Q14722 419 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 PLCL1Q15111 1095 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 NR6A1Q15406 480 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.53□□□□□ -0.72
TDP1-212ENST00000555565 SLC6A19Q695T7 634 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 KLHL35Q6PF15 583 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 CERS6Q6ZMG9 384 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 MICALCLQ6ZW33 695 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 PPP1R3BQ86XI6 285 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 SNRNP40Q96DI7 357 aaKnown RBP10.53□□□□□ -0.72
TDP1-212ENST00000555565 STAMBPL1Q96FJ0 436 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 LINC00615Q96LM1 132 aaPredicted RBP10.53□□□□□ -0.72
TDP1-212ENST00000555565 C12orf66Q96MD2 445 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 BARD1Q99728 777 aaKnown RBP10.53□□□□□ -0.72
TDP1-212ENST00000555565 MAP3K3Q99759 626 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 C19orf43Q9BQ61 176 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 TBL1YQ9BQ87 522 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 MFRPQ9BY79 579 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 ING2Q9H160 280 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 KIR3DX1Q9H7L2 352 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 SLC24A2Q9UI40 661 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 LNPEPQ9UIQ6 1025 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 ACSL5Q9ULC5 683 aa10.53□□□□□ -0.72
TDP1-212ENST00000555565 OR5K3A6NET4 321 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 TLCD2A6NGC4 264 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 CCL22O00626 93 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 LDB2O43679 373 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 METTL18O95568 372 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 SLC35G4P0C7Q5 338 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 CCNYL3P0C7X3 344 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 EBLN1P0CF75 366 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 HADHAP40939 763 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 CETN2P41208 172 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 PRLHRP49683 370 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 CDKN1CP49918 316 aaPredicted RBP10.52□□□□□ -0.73
TDP1-212ENST00000555565 TUBB3Q13509 450 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 KRTAP21-3Q3LHN1 58 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 CRB2Q5IJ48 1285 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 DNTTIP2Q5QJE6 756 aaKnown RBP10.52□□□□□ -0.73
TDP1-212ENST00000555565 KCTD11Q693B1 232 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 PWWP2BQ6NUJ5 590 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 FAM199XQ6PEV8 388 aaPredicted RBP10.52□□□□□ -0.73
TDP1-212ENST00000555565 SNX20Q7Z614 316 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 TMEM139Q8IV31 216 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 CFAP206Q8IYR0 622 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 NXPE1Q8N323 547 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 SIDT2Q8NBJ9 832 aaKnown RBP10.52□□□□□ -0.73
TDP1-212ENST00000555565 TTC13Q8NBP0 860 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 FDCSPQ8NFU4 85 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 ADAMTS17Q8TE56 1095 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 ZFPM2Q8WW38 1151 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 MARVELD3Q96A59 401 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 PNPLA2Q96AD5 504 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 DCUN1D1Q96GG9 259 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 DNAJC1Q96KC8 554 aaKnown RBP10.52□□□□□ -0.73
TDP1-212ENST00000555565 RMDN2Q96LZ7 410 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 C5orf34Q96MH7 638 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 PPP1R2P1Q96PQ5 205 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 CD180Q99467 661 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 COPS8Q99627 209 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 NUDT9Q9BW91 350 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 GPR87Q9BY21 358 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 SLC29A3Q9BZD2 475 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 FAM96AQ9H5X1 160 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 PDE7BQ9NP56 450 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 FGF21Q9NSA1 209 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 ASF1BQ9NVP2 202 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 HRASLS2Q9NWW9 162 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 CRLS1Q9UJA2 301 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 PACSIN2Q9UNF0 486 aaPredicted RBP10.52□□□□□ -0.73
TDP1-212ENST00000555565 PCDHGB7Q9Y5F8 929 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 POLEQ07864 2286 aa10.52□□□□□ -0.73
TDP1-212ENST00000555565 IGLV3-16A0A075B6K0 115 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 TRBV5-4A0A0C4DH59 114 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 A0A0U1RQJ8 604 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 UBA6A0AVT1 1052 aaPredicted RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 OR6C74A6NCV1 312 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 ARGFXA6NJG6 315 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 DDX3YO15523 660 aaKnown RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 HNRNPRO43390 633 aaKnown RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 POLBP06746 335 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 PRSS56P0CW18 603 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 RALBP11234 206 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 ATP1B2P14415 290 aaPredicted RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 ITGALP20701 1170 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 VARSP26640 1264 aaKnown RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 PTPN4P29074 926 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 ARCN1P48444 511 aaKnown RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 KPNA2P52292 529 aaKnown RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 ACY1Q03154 408 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 KLF1Q13351 362 aaPredicted RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 GSE1Q14687 1217 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 PARP6Q2NL67 630 aa10.51□□□□□ -0.73
TDP1-212ENST00000555565 PLEKHN1Q494U1 663 aaPredicted RBP10.51□□□□□ -0.73
TDP1-212ENST00000555565 ZNF658BQ4V348 819 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms