RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 EIF3FO00303 357 aaPredicted RBP9.97□□□□□ -0.81
SRP54-208ENST00000555557 FFAR2O15552 330 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 SMIM24O75264 130 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 RASGRP1O95267 797 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 MATN4O95460 622 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 KELP23276 732 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 AK4P27144 223 aaPredicted RBP9.97□□□□□ -0.81
SRP54-208ENST00000555557 NUDT1P36639 197 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 BDKRB1P46663 353 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 RPIAP49247 311 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 AGTR2P50052 363 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 PRKAA2P54646 552 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 STX3Q13277 289 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 TUBB8Q3ZCM7 444 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 CCSMST1Q4G0I0 132 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 METRNLQ641Q3 311 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 RGS9BPQ6ZS82 235 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 WDR5BQ86VZ2 330 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 LONP2Q86WA8 852 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 FBXO39Q8N4B4 442 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 OXR1Q8N573 874 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 PHC3Q8NDX5 983 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 OR6Y1Q8NGX8 325 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 THOC1Q96FV9 657 aaKnown RBP9.97□□□□□ -0.81
SRP54-208ENST00000555557 OR2M4Q96R27 311 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 SHCBP1LQ9BZQ2 653 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 PCED1AQ9H1Q7 454 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 EPN3Q9H201 632 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 OR52A5Q9H2C5 316 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 OARD1Q9Y530 152 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 ASB1Q9Y576 335 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 DNMT3AQ9Y6K1 912 aaPredicted RBP9.97□□□□□ -0.81
SRP54-208ENST00000555557 MYO15AQ9UKN7 3530 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 SPTY2D1-AS1A0A0U1RR47 76 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 A0A1W2PR77 199 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 FAM86C2PA6NEL3 165 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 ARHGEF33A8MVX0 844 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 SNX2O60749 519 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 SERPINE1P05121 402 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 C8GP07360 202 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 GSTM1P09488 218 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 TSPAN8P19075 237 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 ITPKAP23677 461 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 CD38P28907 300 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 SLC1A6P48664 564 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 CLCNKAP51800 687 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 CDH13P55290 713 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 CTBSQ01459 385 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 GSTM4Q03013 218 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 OVGP1Q12889 678 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 EIF2B5Q13144 721 aaKnown RBP9.97□□□□□ -0.81
SRP54-208ENST00000555557 FZD2Q14332 565 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.97□□□□□ -0.81
SRP54-208ENST00000555557 PRAMEF14Q5SWL7 426 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 FAM219BQ5XKK7 198 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 ATG16L1Q676U5 607 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 NEK10Q6ZWH5 1172 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 TRIM42Q8IWZ5 723 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 C1orf216Q8TAB5 229 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 EGFL8Q99944 293 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 TIMM29Q9BSF4 260 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 SLC12A9Q9BXP2 914 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 PITPNM3Q9BZ71 974 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 ZDHHC5Q9C0B5 715 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 WWP1Q9H0M0 922 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 DUSP15Q9H1R2 295 aaPredicted RBP9.97□□□□□ -0.81
SRP54-208ENST00000555557 PARVBQ9HBI1 364 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 TM9SF3Q9HD45 589 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 PRDM8Q9NQV8 689 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 GPR27Q9NS67 375 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 ATXN2Q99700 1313 aaKnown RBP9.97□□□□□ -0.81
SRP54-208ENST00000555557 EML5Q05BV3 1969 aa9.97□□□□□ -0.81
SRP54-208ENST00000555557 ANKRD12Q6UB98 2062 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 TOR1BO14657 336 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 TNFRSF10CO14798 259 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 KLF11O14901 512 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 HRO43593 1189 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 KLK8O60259 260 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 PSIP1O75475 530 aaKnown RBP9.96□□□□□ -0.81
SRP54-208ENST00000555557 SUPT7LO94864 414 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 CHRNGP07510 517 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 VCLP18206 1134 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 IMPDH1P20839 514 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 ACADLP28330 430 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 EEF1DP29692 281 aaKnown RBP9.96□□□□□ -0.81
SRP54-208ENST00000555557 AVPR2P30518 371 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 GDF5P43026 501 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 CSNK1EP49674 416 aaKnown RBP9.96□□□□□ -0.81
SRP54-208ENST00000555557 DNAJB13P59910 316 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 RACK1P63244 317 aaKnown RBP9.96□□□□□ -0.81
SRP54-208ENST00000555557 PTK2BQ14289 1009 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 ZXDCQ2QGD7 858 aaPredicted RBP9.96□□□□□ -0.81
SRP54-208ENST00000555557 UNC50Q53HI1 259 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 ZNF678Q5SXM1 525 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 SLC30A9Q6PML9 568 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 LPCAT2Q7L5N7 544 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 SLC22A9Q8IVM8 553 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 FBXL6Q8N531 539 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 MFSD2AQ8NA29 543 aa9.96□□□□□ -0.81
SRP54-208ENST00000555557 DNASE2BQ8WZ79 361 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms