RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ATP1B2P14415 290 aaPredicted RBP23.78■■□□□ 1.4
TMEM260-207ENST00000555497 GSK3BP49841 420 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 HMGCS1Q01581 520 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 PRKG2Q13237 762 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 SGO1Q5FBB7 561 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 ZDHHC20Q5W0Z9 365 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 AHI1Q8N157 1196 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 PCDH12Q9NPG4 1184 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 UBAP1Q9NZ09 502 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 PKD2L2Q9NZM6 624 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 USP22Q9UPT9 525 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 ZFC3H1O60293 1989 aaKnown RBP23.78■■□□□ 1.4
TMEM260-207ENST00000555497 SLC2A4P14672 509 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 VIPR1P32241 457 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 DGKQP52824 942 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 POM121L1PQ3SYA9 428 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 MTX3Q5HYI7 312 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 ZNF648Q5T619 568 aaPredicted RBP23.78■■□□□ 1.4
TMEM260-207ENST00000555497 FOXB2Q5VYV0 432 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 NANOGP8Q6NSW7 305 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 UBE2R2Q712K3 238 aaPredicted RBP23.78■■□□□ 1.4
TMEM260-207ENST00000555497 IFNEQ86WN2 208 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 ZNF366Q8N895 744 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 COQ10BQ9H8M1 238 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 NANOGQ9H9S0 305 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 ARL15Q9NXU5 204 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 MARK1Q9P0L2 795 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 AP4B1Q9Y6B7 739 aa23.78■■□□□ 1.4
TMEM260-207ENST00000555497 A0A1W2PQ67 120 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 LINC01553A4QN01 128 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 ARPC2O15144 300 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 SGTAO43765 313 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 ANXA5P08758 320 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 EPB42P16452 691 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 AKT1P31749 480 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 ETV3P41162 512 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 LIPEQ05469 1076 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 BNIP2Q12982 314 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 LCN8Q6JVE9 175 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 ACTR3BQ9P1U1 418 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 ZNHIT2Q9UHR6 403 aa23.77■■□□□ 1.4
TMEM260-207ENST00000555497 EBLN1P0CF75 366 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 SYN1P17600 705 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 HOXA9P31269 272 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 SOX11P35716 441 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 RPL38P63173 70 aaKnown RBP23.76■■□□□ 1.39
TMEM260-207ENST00000555497 GK3PQ14409 553 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 GRM2Q14416 872 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 SLC44A4Q53GD3 710 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 C6orf52Q5T4I8 152 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 NAIF1Q69YI7 327 aaPredicted RBP23.76■■□□□ 1.39
TMEM260-207ENST00000555497 MARVELD2Q8N4S9 558 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 ASB11Q8WXH4 323 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 EME1Q96AY2 570 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 FAM83DQ9H4H8 585 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 ALG2Q9H553 416 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 TMEM45AQ9NWC5 275 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 PDP2Q9P2J9 529 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 TRPS1Q9UHF7 1281 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 ZNF490Q9ULM2 529 aaPredicted RBP23.76■■□□□ 1.39
TMEM260-207ENST00000555497 RAB26Q9ULW5 256 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 CHD9Q3L8U1 2897 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 PLXNA2O75051 1894 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 MANBAO00462 879 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 STAMBPO95630 424 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 MTHFD1P11586 935 aaKnown RBP23.76■■□□□ 1.39
TMEM260-207ENST00000555497 MSH3P20585 1137 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 BOP1Q14137 746 aaKnown RBP23.76■■□□□ 1.39
TMEM260-207ENST00000555497 TCEAL5Q5H9L2 206 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 METTL2BQ6P1Q9 378 aaKnown RBP23.76■■□□□ 1.39
TMEM260-207ENST00000555497 DLEU7Q6UYE1 221 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 RTL10Q7L3V2 364 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 CHCHD4Q8N4Q1 142 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 BEND7Q8N7W2 519 aaPredicted RBP23.76■■□□□ 1.39
TMEM260-207ENST00000555497 ITFG1Q8TB96 612 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 ZNF707Q96C28 371 aaPredicted RBP23.76■■□□□ 1.39
TMEM260-207ENST00000555497 PPP3R2Q96LZ3 170 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 SLC12A9Q9BXP2 914 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 CCM2LQ9NUG4 571 aaPredicted RBP23.76■■□□□ 1.39
TMEM260-207ENST00000555497 ARMC1Q9NVT9 282 aa23.76■■□□□ 1.39
TMEM260-207ENST00000555497 C7orf72A4D263 438 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 AQP12BA6NM10 295 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 NUAK1O60285 661 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 ZNF30P17039 623 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 PTGR1Q14914 329 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 KIAA0040Q15053 153 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 DHCR24Q15392 516 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 NRF1Q16656 503 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 AQP12AQ8IXF9 295 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 RGL4Q8IZJ4 473 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 DPP10Q8N608 796 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 ZNF557Q8N988 423 aaPredicted RBP23.75■■□□□ 1.39
TMEM260-207ENST00000555497 SKA2Q8WVK7 121 aaPredicted RBP23.75■■□□□ 1.39
TMEM260-207ENST00000555497 MTFMTQ96DP5 389 aaKnown RBP23.75■■□□□ 1.39
TMEM260-207ENST00000555497 SLC29A1Q99808 456 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 PARVBQ9HBI1 364 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 FADS2P1A8MWK0 482 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 UPK3BL1B0FP48 263 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 UPK3BL2E5RIL1 263 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 XYLBO75191 536 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms