RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PCDHGA7Q9Y5G6 932 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 PTPRQQ9UMZ3 2332 aa11.8□□□□□ -0.52
SRP54-206ENST00000555317 OR6C74A6NCV1 312 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 CDRT15L2A8MXV6 281 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 E5RI56 91 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 MATN2O00339 956 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 FANCGO15287 622 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 NVLO15381 856 aaKnown RBP11.79□□□□□ -0.52
SRP54-206ENST00000555317 TOX3O15405 576 aaPredicted RBP11.79□□□□□ -0.52
SRP54-206ENST00000555317 ESR1P03372 595 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 ANKRD34CP0C6C1 535 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 ARNTP27540 789 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 CD82P27701 267 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 FMO4P31512 558 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 SLC5A2P31639 672 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 EIF2S3P41091 472 aaKnown RBP11.79□□□□□ -0.52
SRP54-206ENST00000555317 LEPRP48357 1165 aaKnown RBP11.79□□□□□ -0.52
SRP54-206ENST00000555317 SEPHS1P49903 392 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 ITGA8P53708 1063 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 DHX9Q08211 1270 aaKnown RBP11.79□□□□□ -0.52
SRP54-206ENST00000555317 C2orf54Q08AI8 447 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 CALCOCO2Q13137 446 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 HIF1AQ16665 826 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 TYSND1Q2T9J0 566 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 CACHD1Q5VU97 1274 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 CYB5D1Q6P9G0 228 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 NAPRTQ6XQN6 538 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 ARHGAP22Q7Z5H3 698 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 TMEM135Q86UB9 458 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 CILP2Q8IUL8 1156 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 LMNTD2Q8IXW0 634 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 SPATA4Q8NEY3 305 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 ZNF592Q92610 1267 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 USP7Q93009 1102 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 ART4Q93070 314 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 PRR11Q96HE9 360 aaPredicted RBP11.79□□□□□ -0.52
SRP54-206ENST00000555317 TRIM56Q9BRZ2 755 aaKnown RBP11.79□□□□□ -0.52
SRP54-206ENST00000555317 ASPSCR1Q9BZE9 553 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 INTS10Q9NVR2 710 aaKnown RBP11.79□□□□□ -0.52
SRP54-206ENST00000555317 HRASLS2Q9NWW9 162 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 IL1RAPL1Q9NZN1 696 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 OGFRQ9NZT2 677 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 EPHA6Q9UF33 1036 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 POLG2Q9UHN1 485 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 TDRKHQ9Y2W6 561 aaKnown RBP11.79□□□□□ -0.52
SRP54-206ENST00000555317 PCDHB11Q9Y5F2 797 aa11.79□□□□□ -0.52
SRP54-206ENST00000555317 NBEAQ8NFP9 2946 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 A0A087WV48 116 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 SLC5A10A0PJK1 596 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 GSAPA4D1B5 854 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 OR5K3A6NET4 321 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 FAM187AA6NFU0 413 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 IQCF5A8MTL0 148 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 B4E171 279 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 MAP3K7O43318 606 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 PRAMEF10O60809 474 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 SEC31AO94979 1220 aaKnown RBP11.78□□□□□ -0.52
SRP54-206ENST00000555317 C9P02748 559 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 CCL4P13236 92 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 CHRM3P20309 590 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 CCR7P32248 378 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 ETV5P41161 510 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 TSPAN7P41732 249 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 ARCN1P48444 511 aaKnown RBP11.78□□□□□ -0.52
SRP54-206ENST00000555317 FOXM1Q08050 763 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 PRKG2Q13237 762 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 CRYMQ14894 314 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 ZNF658BQ4V348 819 aaPredicted RBP11.78□□□□□ -0.52
SRP54-206ENST00000555317 DCAF12Q5T6F0 453 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 TTC23LQ6PF05 361 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 CEACAM20Q6UY09 585 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 PRSS42Q7Z5A4 293 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 KCNMB4Q86W47 210 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 SLC22A15Q8IZD6 547 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 KRT222Q8N1A0 295 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 PHC3Q8NDX5 983 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 OR4E2Q8NGC2 313 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 CFAP61Q8NHU2 1237 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 HNRNPLLQ8WVV9 542 aaKnown RBP11.78□□□□□ -0.52
SRP54-206ENST00000555317 UBXN4Q92575 508 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 LPGAT1Q92604 370 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 CFAP36Q96G28 342 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 SIGLEC10Q96LC7 697 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 FOPNLQ96NB1 174 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 FCRL3Q96P31 734 aaPredicted RBP11.78□□□□□ -0.52
SRP54-206ENST00000555317 TEFMQ96QE5 360 aaKnown RBP11.78□□□□□ -0.52
SRP54-206ENST00000555317 CD180Q99467 661 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 EBNA1BP2Q99848 306 aaKnown RBP11.78□□□□□ -0.52
SRP54-206ENST00000555317 DDA1Q9BW61 102 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 DPH1Q9BZG8 443 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 B3GNT4Q9C0J1 378 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 RAB33BQ9H082 229 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 P2RY12Q9H244 342 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 ZNF768Q9H5H4 540 aaKnown RBP11.78□□□□□ -0.52
SRP54-206ENST00000555317 PPANQ9NQ55 473 aaKnown RBP11.78□□□□□ -0.52
SRP54-206ENST00000555317 CRYL1Q9Y2S2 319 aa11.78□□□□□ -0.52
SRP54-206ENST00000555317 UTP11Q9Y3A2 253 aaKnown RBP11.78□□□□□ -0.52
SRP54-206ENST00000555317 CFAP47Q6ZTR5 3102 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 ZCWPW2A0A1B0GU75 182 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 TLCD2A6NGC4 264 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms