RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 IGSF8Q969P0 613 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 PTERQ96BW5 349 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 RPRD1AQ96P16 312 aaPredicted RBP10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 ATOH8Q96SQ7 321 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 CDK5RAP1Q96SZ6 601 aaKnown RBP10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 BTBD2Q9BX70 525 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 SLIRPQ9GZT3 109 aaKnown RBP10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 DUSP21Q9H596 190 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 SCN3BQ9NY72 215 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 OSGIN1Q9UJX0 560 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 GABRQQ9UN88 632 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 DOCK4Q8N1I0 1966 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 SLC12A8A0AV02 714 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 H0Y626 953 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 CD3EAPO15446 510 aaKnown RBP10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 KERAO60938 352 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 XYLBO75191 536 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 CRCPO75575 148 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 TRIM16O95361 564 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 MLYCDO95822 493 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 RPS17P08708 135 aaKnown RBP10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 KCNC1P48547 511 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 GPR15P49685 360 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 CDH13P55290 713 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 YBX1P67809 324 aaKnown RBP10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 IFITM2Q01629 132 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 ZNF45Q02386 682 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 CDK5R2Q13319 367 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 CAMK2BQ13554 666 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 KEAP1Q14145 624 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 LRIT3Q3SXY7 679 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 FUT11Q495W5 492 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 C5orf22Q49AR2 442 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 C10orf120Q5SQS8 335 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 SDHAF4Q5VUM1 108 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 ALG1LQ6GMV1 187 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 TXNDC11Q6PKC3 985 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 TMEM207Q6UWW9 146 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 DSG4Q86SJ6 1040 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 RNF180Q86T96 592 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 RTN4RL1Q86UN2 441 aaPredicted RBP10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 PGBD5Q8N414 524 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 C2orf15Q8WU43 125 aaKnown RBP10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 ATL1Q8WXF7 558 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 SEMA3CQ99985 751 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 NDEL1Q9GZM8 345 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 KAT8Q9H7Z6 458 aaKnown RBP10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 SYTL2Q9HCH5 934 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 TRMT13Q9NUP7 481 aaKnown RBP10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 PMF1-BGLAPU3KQ54 211 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 H3BMM5 538 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 B4GALT3O60512 393 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 SCELO95171 688 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 ANGPTL1O95841 491 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 CST1P01037 141 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 SERPINF2P08697 491 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 LINC00032P0C843 101 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 CKBP12277 381 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 MTHFD2P13995 350 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 ZNF37AP17032 561 aaPredicted RBP10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 MSH3P20585 1137 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 OR1E1P30953 314 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 GRK4P32298 578 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 ARSDP51689 593 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 APLP1P51693 650 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 DIO3P55073 304 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 CDKN2DP55273 166 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 FOXA1P55317 472 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 SLC35A2P78381 396 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 PWP1Q13610 501 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 DLEU7Q6UYE1 221 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 RBM23Q86U06 439 aaKnown RBP10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 SAPCD2Q86UD0 394 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 HEATR4Q86WZ0 1026 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 HOMEZQ8IX15 550 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 NDNFQ8TB73 568 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 STAG3L4Q8TBR4 150 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 FCGR1BQ92637 280 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 KIAA1191Q96A73 305 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 TMEM74Q96NL1 305 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 SNX18Q96RF0 628 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 GABARAPL1Q9H0R8 117 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 MAGEH1Q9H213 219 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 SIAEQ9HAT2 523 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 TM9SF3Q9HD45 589 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 HEBP1Q9NRV9 189 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 INTS7Q9NVH2 962 aaKnown RBP10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 TMEM161AQ9NX61 479 aa10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 EIF3LQ9Y262 564 aaKnown RBP10.51□□□□□ -0.73
MTHFD1-210ENST00000555252 ANKRD34BA5PLL1 514 aa10.5□□□□□ -0.73
MTHFD1-210ENST00000555252 F5H5T6 163 aa10.5□□□□□ -0.73
MTHFD1-210ENST00000555252 H7C4K7 107 aa10.5□□□□□ -0.73
MTHFD1-210ENST00000555252 SNX4O95219 450 aa10.5□□□□□ -0.73
MTHFD1-210ENST00000555252 GOT2P00505 430 aaKnown RBP10.5□□□□□ -0.73
MTHFD1-210ENST00000555252 MT-ND1P03886 318 aa10.5□□□□□ -0.73
MTHFD1-210ENST00000555252 RETP07949 1114 aa10.5□□□□□ -0.73
MTHFD1-210ENST00000555252 TSPAN8P19075 237 aa10.5□□□□□ -0.73
MTHFD1-210ENST00000555252 TACR2P21452 398 aa10.5□□□□□ -0.73
MTHFD1-210ENST00000555252 TM4SF4P48230 202 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms