RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PARS2Q7L3T8 475 aaKnown RBP4.19□□□□□ -1.74
VTI1B-203ENST00000554636 SLFN11Q7Z7L1 901 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 GLRX5Q86SX6 157 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 PCDH20Q8N6Y1 951 aaKnown RBP4.19□□□□□ -1.74
VTI1B-203ENST00000554636 ISG20Q96AZ6 181 aaKnown RBP4.19□□□□□ -1.74
VTI1B-203ENST00000554636 HMCESQ96FZ2 354 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 MRGPRX4Q96LA9 322 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 CCDC114Q96M63 670 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 OMDQ99983 421 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 HEPHQ9BQS7 1158 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 SNRNP25Q9BV90 132 aaKnown RBP4.19□□□□□ -1.74
VTI1B-203ENST00000554636 TM6SF2Q9BZW4 377 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 LRRC19Q9H756 370 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 PDFQ9HBH1 243 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 PREBQ9HCU5 417 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 PARVAQ9NVD7 372 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 KCTD5Q9NXV2 234 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 VSX1Q9NZR4 365 aaPredicted RBP4.19□□□□□ -1.74
VTI1B-203ENST00000554636 LHX3Q9UBR4 397 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.19□□□□□ -1.74
VTI1B-203ENST00000554636 IL36AQ9UHA7 158 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 KLK13Q9UKR3 277 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 DMTF1Q9Y222 760 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 CA5BQ9Y2D0 317 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 PTPRBP23467 1997 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 APC2O95996 2303 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 ANKRD36A6QL64 1941 aa4.19□□□□□ -1.74
VTI1B-203ENST00000554636 TDRD6O60522 2096 aaKnown RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 ACACAQ13085 2346 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 KMT2BQ9UMN6 2715 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TBC1D3DA0A087WVF3 549 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TBC1D3IA0A087WXS9 549 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TBC1D3EA0A087X179 549 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TBC1D3KA0A087X1G2 549 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TSPAN11A1L157 253 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 ANKRD62A6NC57 917 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TBC1D3FA6NER0 549 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 ZSCAN5CA6NGD5 496 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 EIF3CLB5ME19 914 aaKnown RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TBC1D3LB9A6J9 549 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 RASA4BC9J798 803 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 MASP2O00187 686 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TLR4O00206 839 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 KPNA3O00505 521 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 RAD51BO15315 384 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 INSIG1O15503 277 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 FLRT2O43155 660 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 RASA4O43374 803 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 BUB1O43683 1085 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 KDELR3O43731 214 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 AP1G1O43747 822 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 SGTAO43765 313 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 CREB3O43889 395 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 PEX1O43933 1283 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 LRCH4O75427 683 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 FTLP02792 175 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TBC1D3HP0C7X1 549 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 FTH1P19P0C7X4 201 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 MYBL1P10243 752 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 ADRB3P13945 408 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TCF4P15884 667 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 PRLRP16471 622 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 PTMSP20962 102 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 IL1R2P27930 398 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 CD38P28907 300 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 EPHA8P29322 1005 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 MIPP30301 263 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 MAT2AP31153 395 aaKnown RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 HTR7P34969 479 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 NUDT1P36639 197 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 RECQLP46063 649 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 RXRGP48443 463 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 NEK3P51956 506 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 UBASH3AP57075 661 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 C21orf59P57076 290 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TPI1P60174 286 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TPM4P67936 248 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF844Q08AG5 666 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 DPYSQ14117 519 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 RAB39AQ14964 217 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 POLD3Q15054 466 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 CYTH1Q15438 398 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TRIP6Q15654 476 aaKnown RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 PARP15Q460N3 678 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 SETMARQ53H47 684 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TDRD12Q587J7 1177 aaKnown RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 SEL1L3Q68CR1 1132 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 SP5Q6BEB4 398 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TBC1D3GQ6DHY5 549 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TBC1D3CQ6IPX1 549 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 NEK5Q6P3R8 708 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 SCYL2Q6P3W7 929 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 LEKR1Q6ZMV7 388 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 GCNT7Q6ZNI0 430 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 PRPF39Q86UA1 669 aaKnown RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 IQCHQ86VS3 1027 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 HORMAD1Q86X24 394 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 PSTKQ8IV42 348 aaKnown RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 ARHGAP12Q8IWW6 846 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TBC1D3Q8IZP1 549 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms