RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 TRIM49P0CI25 452 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 TRIM49CP0CI26 452 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 CSF2RAP15509 400 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 PBLDP30039 288 aaPredicted RBP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 STIP1P31948 543 aaKnown RBP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 ACSL1P33121 698 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 THPOP40225 353 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 DPP6P42658 865 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 CLK3P49761 638 aaKnown RBP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 HNRNPH2P55795 449 aaKnown RBP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 SHC2P98077 582 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 YWHAHQ04917 246 aaPredicted RBP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 EPS8Q12929 822 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 GPS2Q13227 327 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 PPIGQ13427 754 aaKnown RBP eCLIP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 DRAP1Q14919 205 aaPredicted RBP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 ADIPOQQ15848 244 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 BAK1Q16611 211 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 UGCGQ16739 394 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 CFAP221Q4G0U5 840 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 PRAMEF17Q5VTA0 474 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 PCSK4Q6UW60 755 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 CXCL17Q6UXB2 119 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 RANBP10Q6VN20 620 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 H2AFVQ71UI9 128 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 MIER3Q7Z3K6 550 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 SZRD1Q7Z422 152 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 TMEM110Q86TL2 294 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 CHSY1Q86X52 802 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 RASGEF1CQ8N431 466 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 TMEM199Q8N511 208 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 METTL13Q8N6R0 699 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 USP38Q8NB14 1042 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 SLC2A12Q8TD20 617 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 KCNJ9Q92806 393 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 ZBTB9Q96C00 473 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 APOPT1Q96IL0 206 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 GDAP1L1Q96MZ0 367 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 SH3GL2Q99962 352 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 CITED2Q99967 270 aaPredicted RBP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 ABHD14AQ9BUJ0 271 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 CLPBQ9H078 707 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 NUAK2Q9H093 628 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 INTS2Q9H0H0 1204 aaKnown RBP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 C1orf21Q9H246 121 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 GOLPH3Q9H4A6 298 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 ST6GALNAC4Q9H4F1 302 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 NCOR1P1Q9H4R4 102 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 LIN28AQ9H9Z2 209 aaKnown RBP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 IL21RQ9HBE5 538 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 PDE7BQ9NP56 450 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 PDGFCQ9NRA1 345 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 SEMA4GQ9NTN9 838 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 SEPT11Q9NVA2 429 aaKnown RBP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 GAR1Q9NY12 217 aaKnown RBP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 VPS18Q9P253 973 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 SEMA5BQ9P283 1151 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 UBA2Q9UBT2 640 aaPredicted RBP5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 DNAJC12Q9UKB3 198 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 CCPG1Q9ULG6 757 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 GRIN2DO15399 1336 aa5.21□□□□□ -1.58
MTHFD1-206ENST00000554353 USP34Q70CQ2 3546 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 SIP14410 1827 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 MYO15AQ9UKN7 3530 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 TMEM150BA6NC51 233 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 ZSCAN5CA6NGD5 496 aaPredicted RBP5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 ASB14A6NK59 587 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 C16orf96A6NNT2 1141 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 AGAP14A8MT82 685 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 PTGES3LE9PB15 166 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 UBXN8O00124 270 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 MAPK13O15264 365 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 PRPSAP2O60256 369 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 SYNCRIPO60506 623 aaKnown RBP5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 ATP9AO75110 1047 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 CCNE2O96020 404 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 F9P00740 461 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 SLPIP03973 132 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 CHRM5P08912 532 aaPredicted RBP5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 NHLRC4P0CG21 123 aaPredicted RBP5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 CHN1P15882 459 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 MATR3P43243 847 aaKnown RBP eCLIP5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 QARSP47897 775 aaKnown RBP5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 CYP2J2P51589 502 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 ZNF41P51814 821 aaPredicted RBP5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 GALCP54803 685 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 RPS6P62753 249 aaKnown RBP5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 GTF2BQ00403 316 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 MYL7Q01449 175 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 CDK18Q07002 472 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 ITGA7Q13683 1181 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 ALCAMQ13740 583 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 PGM5Q15124 567 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 RPS6KA1Q15418 735 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 TRADDQ15628 312 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 EPC2Q52LR7 807 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 FAM69AQ5T7M9 428 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 C8orf74Q6P047 294 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 EMBQ6PCB8 327 aa5.2□□□□□ -1.58
MTHFD1-206ENST00000554353 TMEM88Q6PEY1 159 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms