RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 PLIN3O60664 434 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 H2AFYO75367 372 aaKnown RBP14.18□□□□□ -0.14
SHMT2-210ENST00000553950 PSIP1O75475 530 aaKnown RBP14.18□□□□□ -0.14
SHMT2-210ENST00000553950 MATN4O95460 622 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 RXRGP48443 463 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 PRKAA2P54646 552 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 NAA20P61599 178 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 CDKL1Q00532 357 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 KIR2DS5Q14953 304 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 PRRT3Q5FWE3 981 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 HHATQ5VTY9 493 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 LAYNQ6UX15 382 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 UBE2R2Q712K3 238 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-210ENST00000553950 TAF8Q7Z7C8 310 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 SLC22A9Q8IVM8 553 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 DCUN1D3Q8IWE4 304 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 TRIM42Q8IWZ5 723 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 PLD6Q8N2A8 252 aaKnown RBP14.18□□□□□ -0.14
SHMT2-210ENST00000553950 TCAIMQ8N3R3 496 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 MCOLN3Q8TDD5 553 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 ZBTB9Q96C00 473 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 FAM111AQ96PZ2 611 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 RAB11FIP5Q9BXF6 653 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 TMEM168Q9H0V1 697 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 TRIT1Q9H3H1 467 aaKnown RBP14.18□□□□□ -0.14
SHMT2-210ENST00000553950 ALG9Q9H6U8 611 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 TM7SF3Q9NS93 570 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 SLC23A2Q9UGH3 650 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 OARD1Q9Y530 152 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 PCYT1BQ9Y5K3 369 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-210ENST00000553950 CSNK1G3Q9Y6M4 447 aa14.18□□□□□ -0.14
SHMT2-210ENST00000553950 NEMP2A6NFY4 417 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 ZNF839A8K0R7 811 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 FOXO6A8MYZ6 492 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 AQP9O43315 295 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 SNX2O60749 519 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 PIAS2O75928 621 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 FUCA1P04066 466 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 PROCP04070 461 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 TPBGLP0DKB5 382 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 MYL2P10916 166 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 F3P13726 295 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 RPA3P35244 121 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-210ENST00000553950 GLRBP48167 497 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 CCT8P50990 548 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 NFKB2Q00653 900 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 DLG1Q12959 904 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 GRIK2Q13002 908 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 TSNQ15631 228 aaKnown RBP14.17□□□□□ -0.14
SHMT2-210ENST00000553950 ZNF423Q2M1K9 1284 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 KIF19Q2TAC6 998 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 TRIM61Q5EBN2 209 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 SLC30A9Q6PML9 568 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 ABRAXAS1Q6UWZ7 409 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 FAM83HQ6ZRV2 1179 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-210ENST00000553950 RAB44Q7Z6P3 723 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-210ENST00000553950 ISCA2Q86U28 154 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 GPSM1Q86YR5 675 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 RBM12BQ8IXT5 1001 aaKnown RBP14.17□□□□□ -0.14
SHMT2-210ENST00000553950 TBC1D21Q8IYX1 336 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 ANKRD42Q8N9B4 389 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 ZNF548Q8NEK5 533 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-210ENST00000553950 DYDC1Q8WWB3 177 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 ATL1Q8WXF7 558 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 ASB11Q8WXH4 323 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 GPR78Q96P69 363 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 SLC12A9Q9BXP2 914 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 WWP1Q9H0M0 922 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 MVB12BQ9H7P6 319 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 PARVBQ9HBI1 364 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 CAPN10Q9HC96 672 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 POT1Q9NUX5 634 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 TMEM216Q9P0N5 145 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 POLG2Q9UHN1 485 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 ASF1AQ9Y294 204 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 COLEC10Q9Y6Z7 277 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 R4GN57 208 aa14.17□□□□□ -0.14
SHMT2-210ENST00000553950 ADAMTS9Q9P2N4 1935 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 SUPT3HB4E1H0 165 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 LMO7DNF2Z398 122 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 GFYI3L273 518 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 TK2O00142 265 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 KHNYNO15037 678 aaKnown RBP14.16□□□□□ -0.14
SHMT2-210ENST00000553950 BIRC5O15392 142 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 SUPT3HO75486 399 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 IPO13O94829 963 aaKnown RBP14.16□□□□□ -0.14
SHMT2-210ENST00000553950 RETP07949 1114 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 ANXA6P08133 673 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 ANXA5P08758 320 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 ALPPL2P10696 532 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 MTHFD1P11586 935 aaKnown RBP14.16□□□□□ -0.14
SHMT2-210ENST00000553950 CREB1P16220 341 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 ATP5F1P24539 256 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-210ENST00000553950 ACADLP28330 430 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 HSD17B2P37059 387 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 HNMTP50135 292 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 IL9RQ01113 521 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 KRT33BQ14525 404 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 INAVAQ3KP66 663 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 CAPRIN2Q6IMN6 1127 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms