RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 FOLR1P15328 257 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 FOXN2P32314 431 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 ARCN1P48444 511 aaKnown RBP17.23■□□□□ 0.35
FOXN3-204ENST00000553840 TUBB4BP68371 445 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 PRAMEP78395 509 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 TUBB2AQ13885 445 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 KCNAB1Q14722 419 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 FASTKD1Q53R41 847 aaKnown RBP17.23■□□□□ 0.35
FOXN3-204ENST00000553840 TSTD2Q5T7W7 516 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 C16orf46Q6P387 395 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 DRICH1Q6PGQ1 229 aaPredicted RBP17.23■□□□□ 0.35
FOXN3-204ENST00000553840 PPHLN1Q8NEY8 458 aaKnown RBP17.23■□□□□ 0.35
FOXN3-204ENST00000553840 OR6P1Q8NGX9 317 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 OR8K5Q8NH50 307 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 ELMO1Q92556 727 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 TFGQ92734 400 aaPredicted RBP17.23■□□□□ 0.35
FOXN3-204ENST00000553840 HDAC10Q969S8 669 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 TUBB2BQ9BVA1 445 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 TSSK1BQ9BXA7 367 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 TFB2MQ9H5Q4 396 aaKnown RBP17.23■□□□□ 0.35
FOXN3-204ENST00000553840 CASS4Q9NQ75 786 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 C1GALT1Q9NS00 363 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 HOMER3Q9NSC5 361 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 CROTQ9UKG9 612 aa17.23■□□□□ 0.35
FOXN3-204ENST00000553840 GSAPA4D1B5 854 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 OR51F1A6NGY5 319 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 J3QKU1 62 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 SLC28A2O43868 658 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 KDM1AO60341 852 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 PDHA2P29803 388 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 PREPP48147 710 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 KPNA2P52292 529 aaKnown RBP17.22■□□□□ 0.35
FOXN3-204ENST00000553840 POLE2P56282 527 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 SYTL3Q4VX76 610 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 HOOK3Q86VS8 718 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 OR52E1Q8NGJ3 308 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 OR13J1Q8NGT2 312 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 OR4L1Q8NH43 312 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 SLC25A18Q9H1K4 315 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 SYTL2Q9HCH5 934 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 LHX9Q9NQ69 397 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 KCND1Q9NSA2 647 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 STARD5Q9NSY2 213 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 TUBD1Q9UJT1 453 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 POMT2Q9UKY4 750 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 BTRCQ9Y297 605 aa17.22■□□□□ 0.35
FOXN3-204ENST00000553840 KATNA1O75449 491 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 GOT2P00505 430 aaKnown RBP17.21■□□□□ 0.35
FOXN3-204ENST00000553840 FGGP02679 453 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 GRIA1P42261 906 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 BASP1P80723 227 aaKnown RBP17.21■□□□□ 0.35
FOXN3-204ENST00000553840 KCNAB2Q13303 367 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 BOP1Q14137 746 aaKnown RBP17.21■□□□□ 0.35
FOXN3-204ENST00000553840 ZNF658BQ4V348 819 aaPredicted RBP17.21■□□□□ 0.35
FOXN3-204ENST00000553840 AARS2Q5JTZ9 985 aaKnown RBP17.21■□□□□ 0.35
FOXN3-204ENST00000553840 PWWP2BQ6NUJ5 590 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 PRICKLE2Q7Z3G6 844 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 AMIGO1Q86WK6 493 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 TMEM126BQ8IUX1 230 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 PHC3Q8NDX5 983 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 APOBEC4Q8WW27 367 aaKnown RBP17.21■□□□□ 0.35
FOXN3-204ENST00000553840 SEC14L1Q92503 715 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 RNF31Q96EP0 1072 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 GRPEL1Q9HAV7 217 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 EIF2B3Q9NR50 452 aaKnown RBP17.21■□□□□ 0.35
FOXN3-204ENST00000553840 POLG2Q9UHN1 485 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 ASF1AQ9Y294 204 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 TCAF1Q9Y4C2 921 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 PRSS21Q9Y6M0 314 aa17.21■□□□□ 0.35
FOXN3-204ENST00000553840 PIEZO2Q9H5I5 2752 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 SLC9B1P1A6NJY1 282 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 C2orf74A8MZ97 194 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 C21orf140B9A014 251 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 CEP104O60308 925 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 CPNE3O75131 537 aaKnown RBP17.2■□□□□ 0.34
FOXN3-204ENST00000553840 SCRG1O75711 98 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 NTRK1P04629 796 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 ITGB6P18564 788 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 PRDX3P30048 256 aaKnown RBP17.2■□□□□ 0.34
FOXN3-204ENST00000553840 RPL22P35268 128 aaKnown RBP17.2■□□□□ 0.34
FOXN3-204ENST00000553840 ACVR1Q04771 509 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 PRKG2Q13237 762 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 BRD3Q15059 726 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 SIX1Q15475 284 aaPredicted RBP17.2■□□□□ 0.34
FOXN3-204ENST00000553840 GPR19Q15760 415 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 DEFB109BQ30KR1 87 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 PCID2Q5JVF3 399 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 PRUNE1Q86TP1 453 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 TBC1D21Q8IYX1 336 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 SGSM3Q96HU1 749 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 HGH1Q9BTY7 390 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 SLC2A6Q9UGQ3 507 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 PCDHGA6Q9Y5G7 932 aa17.2■□□□□ 0.34
FOXN3-204ENST00000553840 MRPS18BQ9Y676 258 aaKnown RBP17.2■□□□□ 0.34
FOXN3-204ENST00000553840 BTN3A3O00478 584 aa17.19■□□□□ 0.34
FOXN3-204ENST00000553840 TIAF1O95411 115 aa17.19■□□□□ 0.34
FOXN3-204ENST00000553840 RECKO95980 971 aa17.19■□□□□ 0.34
FOXN3-204ENST00000553840 KLK3P07288 261 aaPredicted RBP17.19■□□□□ 0.34
FOXN3-204ENST00000553840 ZSCAN5DPP0CG00 497 aa17.19■□□□□ 0.34
FOXN3-204ENST00000553840 OAS2P29728 719 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms