RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 hCG_1818297A0A087WSY0 165 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 C5orf60A6NFR6 353 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 E7EQ34 232 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 MEN1O00255 615 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 IPO7O95373 1038 aaKnown RBP9.63□□□□□ -0.87
ACTN1-210ENST00000553779 AGTP01019 485 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 PDGFAP04085 211 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 ALPPP05187 535 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 HBQ1P09105 142 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 VARSP26640 1264 aaKnown RBP9.63□□□□□ -0.87
ACTN1-210ENST00000553779 PSMB4P28070 264 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 HADHAP40939 763 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 LMAN1P49257 510 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 VAV2P52735 878 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 ITGA1P56199 1179 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 RAPSNQ13702 412 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 ELOAQ14241 798 aaKnown RBP9.63□□□□□ -0.87
ACTN1-210ENST00000553779 PTPRCAPQ14761 206 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 SPA17Q15506 151 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 ASTE1Q2TB18 679 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-210ENST00000553779 PTCHD3Q3KNS1 767 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 BCL7AQ4VC05 210 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 ZRANB3Q5FWF4 1079 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 IZUMO3Q5VZ72 239 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 CAPRIN2Q6IMN6 1127 aaKnown RBP9.63□□□□□ -0.87
ACTN1-210ENST00000553779 DARS2Q6PI48 645 aaKnown RBP9.63□□□□□ -0.87
ACTN1-210ENST00000553779 SARM1Q6SZW1 724 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 KATNAL2Q8IYT4 538 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 DSELQ8IZU8 1212 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 SSC4DQ8WTU2 575 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 HEXDCQ8WVB3 486 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 ZNF501Q96CX3 271 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-210ENST00000553779 CHP1Q99653 195 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 C17orf62Q9BQA9 187 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 NLNQ9BYT8 704 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 KLHL25Q9H0H3 589 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 FAM96AQ9H5X1 160 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 SYTL2Q9HCH5 934 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 LATS2Q9NRM7 1088 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 C1GALT1Q9NS00 363 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 SEMA5BQ9P283 1151 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 PLEKHB1Q9UF11 243 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-210ENST00000553779 NDOR1Q9UHB4 597 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 TCFL5Q9UL49 500 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 INTUQ9ULD6 942 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 BTRCQ9Y297 605 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 AAR2Q9Y312 384 aaKnown RBP9.63□□□□□ -0.87
ACTN1-210ENST00000553779 PCDHGB7Q9Y5F8 929 aa9.63□□□□□ -0.87
ACTN1-210ENST00000553779 A1L4Q6 167 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 C2orf74A8MZ97 194 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 AKR1B15C9JRZ8 316 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-210ENST00000553779 APOC4-APOC2K7ER74 178 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 PEX12O00623 359 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 KCNN4O15554 427 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 KDM1AO60341 852 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 LCA5LO95447 670 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 APOC2P02655 101 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 RAB40ALP0C0E4 278 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 ATP1B2P14415 290 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-210ENST00000553779 RBL1P28749 1068 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 FOLR3P41439 243 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 MAGEA1P43355 309 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 PRLHRP49683 370 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 ABRQ12979 859 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 ATP1A4Q13733 1029 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 NCF4Q15080 339 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 LYPLAL1Q5VWZ2 237 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 MED25Q71SY5 747 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 SNX20Q7Z614 316 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 HPS6Q86YV9 775 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 VSTM4Q8IW00 320 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 NXPE1Q8N323 547 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 TMEM102Q8N9M5 508 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-210ENST00000553779 CLEC1AQ8NC01 280 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 OR1L3Q8NH93 324 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 PRR7Q8TB68 274 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 PPM1MQ96MI6 270 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 LRFN5Q96NI6 719 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 TBL1YQ9BQ87 522 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 DPH2Q9BQC3 489 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-210ENST00000553779 ILKAPQ9H0C8 392 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-210ENST00000553779 GOLPH3Q9H4A6 298 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 AKIRIN1Q9H9L7 192 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-210ENST00000553779 TXLNGQ9NUQ3 528 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 ALG6Q9Y672 507 aa9.62□□□□□ -0.87
ACTN1-210ENST00000553779 MYO7BQ6PIF6 2116 aa9.61□□□□□ -0.87
ACTN1-210ENST00000553779 HEATR5BQ9P2D3 2071 aa9.61□□□□□ -0.87
ACTN1-210ENST00000553779 NBPF19A0A087WUL8 3843 aa9.61□□□□□ -0.87
ACTN1-210ENST00000553779 CLEC18AA5D8T8 446 aa9.61□□□□□ -0.87
ACTN1-210ENST00000553779 BTN3A1O00481 513 aa9.61□□□□□ -0.87
ACTN1-210ENST00000553779 GAPDHSO14556 408 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-210ENST00000553779 LDB2O43679 373 aa9.61□□□□□ -0.87
ACTN1-210ENST00000553779 KLHL41O60662 606 aa9.61□□□□□ -0.87
ACTN1-210ENST00000553779 ZNF189O75820 626 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-210ENST00000553779 OR2B3O76000 313 aa9.61□□□□□ -0.87
ACTN1-210ENST00000553779 PVRP15151 417 aa9.61□□□□□ -0.87
ACTN1-210ENST00000553779 ST6GAL1P15907 406 aa9.61□□□□□ -0.87
ACTN1-210ENST00000553779 MC4RP32245 332 aa9.61□□□□□ -0.87
ACTN1-210ENST00000553779 MARCKSL1P49006 195 aa9.61□□□□□ -0.87
ACTN1-210ENST00000553779 EIF3EP60228 445 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms