RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CHMP24386 653 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 SLC6A12P48065 614 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 CAMPP49913 170 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 SNRPEP62304 92 aaKnown RBP3.51□□□□□ -1.85
SCFD1-210ENST00000553693 PLA2G7Q13093 441 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 RALBP1Q15311 655 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 ASTE1Q2TB18 679 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-210ENST00000553693 ZNF613Q6PF04 617 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 CFAP77Q6ZQR2 320 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 MMS22LQ6ZRQ5 1243 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 SLC16A9Q7RTY1 509 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 PXKQ7Z7A4 578 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 ZNF554Q86TJ5 538 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 DNAJC22Q8N4W6 341 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 BMPERQ8N8U9 685 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 ZNF383Q8NA42 475 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 PPFIBP2Q8ND30 876 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 TDRD7Q8NHU6 1098 aaKnown RBP3.51□□□□□ -1.85
SCFD1-210ENST00000553693 MTERF3Q96E29 417 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 ZNF582Q96NG8 517 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-210ENST00000553693 MYADMQ96S97 322 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 VGLL1Q99990 258 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 SYT11Q9BT88 431 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 CABLES2Q9BTV7 478 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 DNAJC18Q9H819 358 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 MBNL1Q9NR56 388 aaKnown RBP3.51□□□□□ -1.85
SCFD1-210ENST00000553693 SLC7A10Q9NS82 523 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 C9orf78Q9NZ63 289 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-210ENST00000553693 PNMA2Q9UL42 364 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 CD109Q6YHK3 1445 aa3.51□□□□□ -1.85
SCFD1-210ENST00000553693 PCF11O94913 1555 aaKnown RBP3.51□□□□□ -1.85
SCFD1-210ENST00000553693 KDM5BQ9UGL1 1544 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 ADAMTSL3P82987 1691 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 IGLV7-46A0A075B6I9 117 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 A0A1W2PRB8 838 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 DNM1LO00429 736 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 ATP6V0E1O15342 81 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 FRMD6-AS1P0C7T7 363 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 HOXC13P31276 330 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 DSCR10P59022 87 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 CDR2Q01850 454 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 LGALS3BPQ08380 585 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 IKQ13123 557 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-210ENST00000553693 P2RY6Q15077 328 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 ALFQ53S48 1182 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 P2RY8Q86VZ1 359 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 OR1J1Q8NGS3 322 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 GRHL3Q8TE85 626 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 FAM222BQ8WU58 562 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 SUSD6Q92537 303 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 DAZLQ92904 295 aaKnown RBP3.5□□□□□ -1.85
SCFD1-210ENST00000553693 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 SGK494Q96LW2 274 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 AGAP3Q96P47 875 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 FGFBP2Q9BYJ0 223 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 PITPNM3Q9BZ71 974 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 P2RY12Q9H244 342 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 SLA2Q9H6Q3 261 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 PELI2Q9HAT8 420 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 HHATLQ9HCP6 504 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 AMACRQ9UHK6 382 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 SPIN1Q9Y657 262 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-210ENST00000553693 PIAS3Q9Y6X2 628 aa3.5□□□□□ -1.85
SCFD1-210ENST00000553693 MAGI3Q5TCQ9 1506 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 ZCCHC11Q5TAX3 1644 aaKnown RBP3.49□□□□□ -1.85
SCFD1-210ENST00000553693 IGLV9-49A0A0B4J1Y8 123 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 ELOVL7A1L3X0 281 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 MYO1GB0I1T2 1018 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 WDHD1O75717 1129 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-210ENST00000553693 CDC123O75794 336 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-210ENST00000553693 ZFAND5O76080 213 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 PAX3P23760 479 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 KRT2P35908 639 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 ARL3P36405 182 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 SLC8A3P57103 927 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 SNX16P57768 344 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 PRKAA1Q13131 559 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 G3BP1Q13283 466 aaKnown RBP eCLIP3.49□□□□□ -1.85
SCFD1-210ENST00000553693 HNRNPDQ14103 355 aaKnown RBP3.49□□□□□ -1.85
SCFD1-210ENST00000553693 TMEM198Q66K66 360 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 KLHL35Q6PF15 583 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 CORO6Q6QEF8 472 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 Q6ZSR9 355 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 MCEMP1Q8IX19 187 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 SPAG16Q8N0X2 631 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 LSMEM2Q8N112 164 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 RAB42Q8N4Z0 105 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 ANKRD52Q8NB46 1076 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 TMEM178AQ8NBL3 297 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 ZNRF4Q8WWF5 429 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 PGAM5Q96HS1 289 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 CMTM3Q96MX0 182 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 IWS1Q96ST2 819 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 SYT15Q9BQS2 421 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 DISP1Q96F81 1524 aa3.49□□□□□ -1.85
SCFD1-210ENST00000553693 WDR7Q9Y4E6 1490 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 SPATA31D1Q6ZQQ2 1576 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 A0A1W2PN81 502 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 TPPPO94811 219 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 PIGNO95427 931 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms