RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 INSL5Q9Y5Q6 135 aa4.85□□□□□ -1.63
SCFD1-209ENST00000553280 COL3A1P02461 1466 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-209ENST00000553280 ELOVL7A1L3X0 281 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 OR5K3A6NET4 321 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 NEMP2A6NFY4 417 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 C15orf62A8K5M9 175 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 ANKRD66B4E2M5 251 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 MID1O15344 667 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 BUD23O43709 281 aaKnown RBP4.84□□□□□ -1.63
SCFD1-209ENST00000553280 GPR137BO60478 399 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 BMP10O95393 424 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 CLDN14O95500 239 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 IGHV2-70P01814 119 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 PSG1P11464 419 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 CD22P20273 847 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 ACAT1P24752 427 aaKnown RBP4.84□□□□□ -1.63
SCFD1-209ENST00000553280 MPZP25189 248 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 AZGP1P25311 298 aaKnown RBP4.84□□□□□ -1.63
SCFD1-209ENST00000553280 TIA1P31483 386 aaKnown RBP eCLIP4.84□□□□□ -1.63
SCFD1-209ENST00000553280 LHX1P48742 406 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 BNC1Q01954 994 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 ZNF155Q12901 538 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-209ENST00000553280 TRAF2Q12933 501 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 CDO1Q16878 200 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 GRTP1Q5TC63 336 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 TRNP1Q6NT89 227 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 MFSD12Q6NUT3 480 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 SLC27A1Q6PCB7 646 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 DGLUCYQ7Z3D6 616 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 DZIP1Q86YF9 867 aaKnown RBP4.84□□□□□ -1.63
SCFD1-209ENST00000553280 RNF113BQ8IZP6 322 aaKnown RBP4.84□□□□□ -1.63
SCFD1-209ENST00000553280 OR5M8Q8NGP6 311 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-209ENST00000553280 FAM216AQ8WUB2 273 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 SLC38A5Q8WUX1 472 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 TANKQ92844 425 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 RPL36ALQ969Q0 106 aaKnown RBP4.84□□□□□ -1.63
SCFD1-209ENST00000553280 EXOC4Q96A65 974 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 MIB2Q96AX9 1013 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 MOB3AQ96BX8 217 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 CABS1Q96KC9 395 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 C3orf30Q96M34 536 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 UTP14AQ9BVJ6 771 aaKnown RBP4.84□□□□□ -1.63
SCFD1-209ENST00000553280 LRMDAQ9H2I8 198 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 TMEM30AQ9NV96 361 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 SEPT10Q9P0V9 454 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 RNF150Q9ULK6 438 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 AMDHD2Q9Y303 409 aa4.84□□□□□ -1.63
SCFD1-209ENST00000553280 ABCC9O60706 1549 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 PDS5AQ29RF7 1337 aaKnown RBP4.83□□□□□ -1.64
SCFD1-209ENST00000553280 IGLV5-52A0A0A0MRZ9 124 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 WDR91A4D1P6 747 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 SOCS2O14508 198 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 PPEF2O14830 753 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 AP5Z1O43299 807 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 HTATSF1O43719 755 aaKnown RBP4.83□□□□□ -1.64
SCFD1-209ENST00000553280 GCNT3O95395 438 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 GLUD1P00367 558 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 MT-ND3P03897 115 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 CSN3P07498 182 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 SAGP10523 405 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-209ENST00000553280 EEF2P13639 858 aaKnown RBP4.83□□□□□ -1.64
SCFD1-209ENST00000553280 STMN1P16949 149 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 HLA-DPA1P20036 260 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 TNFRSF8P28908 595 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 SOAT1P35610 550 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 WNT5AP41221 380 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 GLUD2P49448 558 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 GMPSP49915 693 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-209ENST00000553280 ZNF81P51508 661 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 TPD52P55327 224 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-209ENST00000553280 BRWD1-AS2P59051 145 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 PTENP60484 403 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 ASIC1P78348 528 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 RUNX1T1Q06455 604 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 ACTN3Q08043 901 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-209ENST00000553280 AP1B1Q10567 949 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 TRAF3Q13114 568 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 C2orf76Q3KRA6 126 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 TMEM35AQ53FP2 167 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 XKR9Q5GH70 373 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 ZNF704Q6ZNC4 412 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-209ENST00000553280 TMPRSS11BQ86T26 416 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 C1orf87Q8N0U7 546 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 NRACQ8N912 160 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 OR7G3Q8NG95 312 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 OR8H1Q8NGG4 311 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 SPATA22Q8NHS9 363 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 HEXDCQ8WVB3 486 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 NSMAFQ92636 917 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 RAD54LQ92698 747 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 KRT35Q92764 455 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 SEMA4DQ92854 862 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 MTBPQ96DY7 904 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 SCMH1Q96GD3 660 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 ZNF778Q96MU6 729 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 MRPL44Q9H9J2 332 aaKnown RBP4.83□□□□□ -1.64
SCFD1-209ENST00000553280 MID1IP1Q9NPA3 183 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 CACNG4Q9UBN1 327 aa4.83□□□□□ -1.64
SCFD1-209ENST00000553280 ACAD8Q9UKU7 415 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms