RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SOCS5O75159 536 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 HMMRO75330 724 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 RAD51DO75771 328 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 LETM1O95202 739 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-208ENST00000553278 CCDC192P0DO97 292 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 LBPP18428 481 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 GNLYP22749 145 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 HOXA11P31270 313 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-208ENST00000553278 SERPINB6P35237 376 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 IL15P40933 162 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-208ENST00000553278 MAPK12P53778 367 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 SELENOVP59797 346 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 ZNF91Q05481 1191 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 INPP5JQ15735 1006 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-208ENST00000553278 LBHQ53QV2 105 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-208ENST00000553278 GCNT6Q5T4J0 391 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 PAPD7Q5XG87 772 aaKnown RBP5.59□□□□□ -1.51
SCFD1-208ENST00000553278 TTLL10Q6ZVT0 673 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 NRARPQ7Z6K4 114 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 ARHGEF25Q86VW2 580 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 FOXRED2Q8IWF2 684 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 ANKRD13CQ8N6S4 541 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 ZBTB44Q8NCP5 570 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 URGCPQ8TCY9 931 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 IGFBPL1Q8WX77 278 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 SYN2Q92777 582 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-208ENST00000553278 SIGLEC11Q96RL6 698 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 LMF2Q9BU23 707 aaKnown RBP5.59□□□□□ -1.51
SCFD1-208ENST00000553278 CATSPERBQ9H7T0 1116 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 PDGFCQ9NRA1 345 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 LOXL2Q9Y4K0 774 aa5.59□□□□□ -1.51
SCFD1-208ENST00000553278 FAM90A10PA6NDY2 464 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 GOLGA6L9A6NEM1 432 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 NEMP2A6NFY4 417 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 MS4A18H0YCH9 400 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 J3KR12 359 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 CACNB4O00305 520 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-208ENST00000553278 CTDSPLO15194 276 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 TRIM16O95361 564 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 C9P02748 559 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 CSN3P07498 182 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 HEXBP07686 556 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 SBK2P0C263 348 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 MPZP25189 248 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 PSMB4P28070 264 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 RPL3P39023 403 aaKnown RBP5.58□□□□□ -1.52
SCFD1-208ENST00000553278 RABIFP47224 123 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 RASSF2P50749 326 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 MFAP3P55082 362 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 CLDN20P56880 219 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 TFF2Q03403 129 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 KLHL30Q0D2K2 578 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 TRA2AQ13595 282 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCFD1-208ENST00000553278 CUL3Q13618 768 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 RABEP1Q15276 862 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 MAPK11Q15759 364 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 ZNF284Q2VY69 593 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 BRAT1Q6PJG6 821 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 PARM1Q6UWI2 310 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 OLFM4Q6UX06 510 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 MCM10Q7L590 875 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 C1orf52Q8N6N3 182 aaKnown RBP5.58□□□□□ -1.52
SCFD1-208ENST00000553278 MIGA1Q8NAN2 632 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 SEMA6DQ8NFY4 1073 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 HMGCLL1Q8TB92 370 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 THAP6Q8TBB0 222 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 RND1Q92730 232 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 SLC25A28Q96A46 364 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 SYAP1Q96A49 352 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-208ENST00000553278 APOLD1Q96LR9 279 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 ZNF582Q96NG8 517 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-208ENST00000553278 NYXQ9GZU5 481 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 SYTL2Q9HCH5 934 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 SEMA4GQ9NTN9 838 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 TINAGQ9UJW2 476 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 STRAPQ9Y3F4 350 aaKnown RBP5.58□□□□□ -1.52
SCFD1-208ENST00000553278 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCFD1-208ENST00000553278 TEX264Q9Y6I9 313 aa5.58□□□□□ -1.52
SCFD1-208ENST00000553278 TRBV2A0A0J9YWF9 115 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 PRSS51A0A1B0GVH4 220 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 A0A1W2PPC1 479 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 OR2M5A3KFT3 312 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 LINC01548A6NM66 108 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 TIMM23O14925 209 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 NARSO43776 548 aaKnown RBP5.57□□□□□ -1.52
SCFD1-208ENST00000553278 OR10H2O60403 315 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 GLCEO94923 617 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 ABHD2P08910 425 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 ARF4P18085 180 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-208ENST00000553278 AHCYP23526 432 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 NPBWR1P48145 328 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 SERPINH1P50454 418 aaKnown RBP5.57□□□□□ -1.52
SCFD1-208ENST00000553278 TKTL1P51854 596 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 UCP2P55851 309 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 MTCP1P56278 107 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 SEC61BP60468 96 aaKnown RBP5.57□□□□□ -1.52
SCFD1-208ENST00000553278 ZP1P60852 638 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 GMFBP60983 142 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 FOLH1Q04609 750 aa5.57□□□□□ -1.52
SCFD1-208ENST00000553278 TROAPQ12815 778 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms