RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 RENBPP51606 427 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 UBE2IP63279 158 aaKnown RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 NRG1Q02297 640 aaPredicted RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 ID3Q02535 119 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 CEBPZQ03701 1054 aaKnown RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 MFAP5Q13361 173 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 KCNAB1Q14722 419 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 RABEP1Q15276 862 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 CYTH1Q15438 398 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 C3AR1Q16581 482 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 SLC25A52Q3SY17 297 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 C10orf62Q5T681 223 aaPredicted RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 GTF2IRD2BQ6EKJ0 949 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 LCN10Q6JVE6 187 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 HMBOX1Q6NT76 420 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 DENND1BQ6P3S1 775 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 TRIM72Q6ZMU5 477 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 C20orf204Q6ZNR8 217 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 Q6ZVL8 140 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 B4GALNT4Q76KP1 1039 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 SLC26A9Q7LBE3 791 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 GTF2IRD2Q86UP8 949 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 HSCBQ8IWL3 235 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 SYTL1Q8IYJ3 562 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 CEP57L1Q8IYX8 460 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 C1orf131Q8NDD1 294 aaKnown RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 ZNF397Q8NF99 534 aaPredicted RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 OR2Y1Q8NGV0 311 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 LILRB4Q8NHJ6 448 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 NRGNQ92686 78 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 NT5C3BQ969T7 300 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 AP2M1Q96CW1 435 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 ZNF501Q96CX3 271 aaPredicted RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 CXorf40BQ96DE9 158 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 DTD2Q96FN9 168 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 INTS4Q96HW7 963 aaKnown RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 ZFYVE21Q9BQ24 234 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 VKORC1Q9BQB6 163 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 BDH2Q9BUT1 245 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 SLC40A1Q9NP59 571 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 POT1Q9NUX5 634 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 TMEM248Q9NWD8 314 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 GPATCH2LQ9NWQ4 482 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 CRIM1Q9NZV1 1036 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 IL17CQ9P0M4 197 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 VPS18Q9P253 973 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 CGGBP1Q9UFW8 167 aaPredicted RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 SMC3Q9UQE7 1217 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 MRPS2Q9Y399 296 aaKnown RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 CSAG2Q9Y5P2 127 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 SNX10Q9Y5X0 201 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 FHOD1Q9Y613 1164 aa5.02□□□□□ -1.61
CKAP4-203ENST00000553039 ZNF106Q9H2Y7 1883 aaKnown RBP5.02□□□□□ -1.61
CKAP4-203ENST00000553039 CCDC66A2RUB6 948 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 LINC01387J3KSC0 135 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 SOCS6O14544 535 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 PRRG2O14669 202 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 TMPRSS2O15393 492 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 POLR2DO15514 142 aaKnown RBP5.01□□□□□ -1.61
CKAP4-203ENST00000553039 VEGFDO43915 354 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 ULK1O75385 1050 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 CRLF1O75462 422 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 DAB1O75553 588 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 CTAG2O75638 210 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 PALMO75781 387 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 HEXIM1O94992 359 aaKnown RBP5.01□□□□□ -1.61
CKAP4-203ENST00000553039 SNUPNO95149 360 aaKnown RBP5.01□□□□□ -1.61
CKAP4-203ENST00000553039 LETM1O95202 739 aaPredicted RBP5.01□□□□□ -1.61
CKAP4-203ENST00000553039 FKBP9O95302 570 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 CRTAMO95727 393 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 KRT5P13647 590 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 ACP5P13686 325 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 GM2AP17900 193 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 IGFBP2P18065 325 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 ITGAXP20702 1163 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 RORAP35398 523 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 PEX19P40855 299 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 TNFSF10P50591 281 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 RNF4P78317 190 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 DCDP81605 110 aaKnown RBP5.01□□□□□ -1.61
CKAP4-203ENST00000553039 OCRLQ01968 901 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 RUNX1T1Q06455 604 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 PDCLQ13371 301 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 CUL4BQ13620 913 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 KEAP1Q14145 624 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 SLBPQ14493 270 aaKnown RBP eCLIP5.01□□□□□ -1.61
CKAP4-203ENST00000553039 CDSNQ15517 529 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 GPR19Q15760 415 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 NKG7Q16617 165 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 DEFB113Q30KQ7 82 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 GRAMD1BQ3KR37 738 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 PARP15Q460N3 678 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 DNTTIP2Q5QJE6 756 aaKnown RBP5.01□□□□□ -1.61
CKAP4-203ENST00000553039 FAM69BQ5VUD6 431 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 ABHD17CQ6PCB6 329 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 SHC4Q6S5L8 630 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 ABRAXAS1Q6UWZ7 409 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 Q6ZPB1 254 aaPredicted RBP5.01□□□□□ -1.61
CKAP4-203ENST00000553039 LINC00696Q6ZRV3 163 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 FKBP9P1Q75LS8 142 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms