RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 C1orf54Q8WWF1 131 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 ATG4AQ8WYN0 398 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 MRGPRX2Q96LB1 330 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 PPP1R2P1Q96PQ5 205 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 INSM2Q96T92 566 aaPredicted RBP11.54□□□□□ -0.56
CKAP4-202ENST00000552828 TMEM121Q9BTD3 319 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 GBA3Q9H227 469 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 KIR3DX1Q9H7L2 352 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 CUEDC1Q9NWM3 386 aaPredicted RBP11.54□□□□□ -0.56
CKAP4-202ENST00000552828 PLEKHB1Q9UF11 243 aaPredicted RBP11.54□□□□□ -0.56
CKAP4-202ENST00000552828 SLC24A2Q9UI40 661 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 ZNF148Q9UQR1 794 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 ZKSCAN5Q9Y2L8 839 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 DOPEY1Q5JWR5 2465 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 ICE1Q9Y2F5 2266 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 MGAT4DA6NG13 374 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 ARGFXA6NJG6 315 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 OR2AG2A6NM03 316 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 F5H423 210 aaPredicted RBP11.53□□□□□ -0.56
CKAP4-202ENST00000552828 MEN1O00255 615 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 AGFG2O95081 481 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 MSL3P1P0C860 447 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 HLA-DPA1P20036 260 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 RORAP35398 523 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 CHRNA4P43681 627 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 CCL11P51671 97 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 GEMP55040 296 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 GNG11P61952 73 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 SLC1A5Q15758 541 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 GPR19Q15760 415 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 CCNG2Q16589 344 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 PLEKHS1Q5SXH7 462 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 FNBP1LQ5T0N5 605 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 TMTC4Q5T4D3 741 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 ARHGEF18Q6ZSZ5 1173 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 OOSP2Q86WS3 158 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 TMEM126BQ8IUX1 230 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 DSELQ8IZU8 1212 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 OR2L2Q8NH16 312 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 MR1Q95460 341 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 OXNAD1Q96HP4 312 aaPredicted RBP11.53□□□□□ -0.56
CKAP4-202ENST00000552828 LINC00615Q96LM1 132 aaPredicted RBP11.53□□□□□ -0.56
CKAP4-202ENST00000552828 NLNQ9BYT8 704 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 WWP1Q9H0M0 922 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 CHST8Q9H2A9 424 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 ACSS2Q9NR19 701 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 HOMER3Q9NSC5 361 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 IMP3Q9NV31 184 aaKnown RBP11.53□□□□□ -0.56
CKAP4-202ENST00000552828 AAR2Q9Y312 384 aaKnown RBP11.53□□□□□ -0.56
CKAP4-202ENST00000552828 PKP3Q9Y446 797 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 ZNF451Q9Y4E5 1061 aa11.53□□□□□ -0.56
CKAP4-202ENST00000552828 CELSR2Q9HCU4 2923 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 OR6C74A6NCV1 312 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 SEMA7AO75326 666 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 KLK3P07288 261 aaPredicted RBP11.52□□□□□ -0.57
CKAP4-202ENST00000552828 CAPN1P07384 714 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 PSMB4P28070 264 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 PTGIRP43119 386 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 KPNA2P52292 529 aaKnown RBP11.52□□□□□ -0.57
CKAP4-202ENST00000552828 CHAF1BQ13112 559 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 SNX1Q13596 522 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 SIX1Q15475 284 aaPredicted RBP11.52□□□□□ -0.57
CKAP4-202ENST00000552828 OASLQ15646 514 aaKnown RBP11.52□□□□□ -0.57
CKAP4-202ENST00000552828 INPP5JQ15735 1006 aaPredicted RBP11.52□□□□□ -0.57
CKAP4-202ENST00000552828 PARP6Q2NL67 630 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 P3H1Q32P28 736 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 BCL7AQ4VC05 210 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 LCN10Q6JVE6 187 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 JMJD6Q6NYC1 403 aaPredicted RBP11.52□□□□□ -0.57
CKAP4-202ENST00000552828 DRICH1Q6PGQ1 229 aaPredicted RBP11.52□□□□□ -0.57
CKAP4-202ENST00000552828 GLT6D1Q7Z4J2 308 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 RASGEF1CQ8N431 466 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 SLC25A41Q8N5S1 370 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 Q8NA96 180 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 GLIS1Q8NBF1 620 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 IPMKQ8NFU5 416 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 SPDYE1Q8NFV5 336 aaPredicted RBP11.52□□□□□ -0.57
CKAP4-202ENST00000552828 ZNF398Q8TD17 642 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 BLOC1S5Q8TDH9 187 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 SSC4DQ8WTU2 575 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 CPT1BQ92523 772 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 LRRC45Q96CN5 670 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 OSBPL9Q96SU4 736 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 NAP1L3Q99457 506 aaPredicted RBP11.52□□□□□ -0.57
CKAP4-202ENST00000552828 FSD1LQ9BXM9 530 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 SYTL2Q9HCH5 934 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 C1GALT1Q9NS00 363 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 TCFL5Q9UL49 500 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 TTC7AQ9ULT0 858 aaPredicted RBP11.52□□□□□ -0.57
CKAP4-202ENST00000552828 SNX12Q9UMY4 172 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 DRG1Q9Y295 367 aaKnown RBP11.52□□□□□ -0.57
CKAP4-202ENST00000552828 CFAP20Q9Y6A4 193 aaKnown RBP11.52□□□□□ -0.57
CKAP4-202ENST00000552828 COLEC10Q9Y6Z7 277 aa11.52□□□□□ -0.57
CKAP4-202ENST00000552828 AGAP14A8MT82 685 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 MATN2O00339 956 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 CES2O00748 559 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 BUD23O43709 281 aaKnown RBP11.51□□□□□ -0.57
CKAP4-202ENST00000552828 SGTAO43765 313 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 DPM1O60762 260 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 PRAMEF1O95521 474 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms