RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 E5RI56 91 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 CAPN5O15484 640 aaPredicted RBP18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 RASSF9O75901 435 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 CCR7P32248 378 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 ELK3P41970 407 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 MAPK10P53779 464 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 GFERP55789 205 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 PRKAA1Q13131 559 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 HP1BP3Q5SSJ5 553 aaPredicted RBP18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 C8orf74Q6P047 294 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 CENPUQ71F23 418 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 FAM129CQ86XR2 697 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 MNS1Q8NEH6 495 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 LCN9Q8WX39 176 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 PWWP2AQ96N64 755 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 SLC46A1Q96NT5 459 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 TRIT1Q9H3H1 467 aaKnown RBP18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 OGFRQ9NZT2 677 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 WHRNQ9P202 907 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 PDP2Q9P2J9 529 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 RAXQ9Y2V3 346 aa18.01■□□□□ 0.47
PRPF40B-216ENST00000552301 URB1O60287 2271 aaKnown RBP18■□□□□ 0.47
PRPF40B-216ENST00000552301 KDM1AO60341 852 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 CAPNS1P04632 268 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 RPN2P04844 631 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 PKMP14618 531 aaKnown RBP18■□□□□ 0.47
PRPF40B-216ENST00000552301 ITIH1P19827 911 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 AOAHP28039 575 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 SLC1A2P43004 574 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 ADARP55265 1226 aaKnown RBP18■□□□□ 0.47
PRPF40B-216ENST00000552301 PCBP4P57723 403 aaKnown RBP18■□□□□ 0.47
PRPF40B-216ENST00000552301 PDIA2Q13087 525 aaKnown RBP18■□□□□ 0.47
PRPF40B-216ENST00000552301 CTBP1Q13363 440 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 TUBB2AQ13885 445 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 HSP90AA5PQ58FG0 334 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 CTSL3PQ5NE16 218 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 TMEM164Q5U3C3 297 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 DENND6AQ8IWF6 608 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 SLC22A15Q8IZD6 547 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 PHC3Q8NDX5 983 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 KIF18AQ8NI77 898 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 SNIP1Q8TAD8 396 aaKnown RBP18■□□□□ 0.47
PRPF40B-216ENST00000552301 SKA2Q8WVK7 121 aaPredicted RBP18■□□□□ 0.47
PRPF40B-216ENST00000552301 DCBLD2Q96PD2 775 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 TUBB2BQ9BVA1 445 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 SRMSQ9H3Y6 488 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 ASCL3Q9NQ33 180 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 PPANQ9NQ55 473 aaKnown RBP18■□□□□ 0.47
PRPF40B-216ENST00000552301 FBXO6Q9NRD1 293 aaPredicted RBP18■□□□□ 0.47
PRPF40B-216ENST00000552301 IARS2Q9NSE4 1012 aaKnown RBP18■□□□□ 0.47
PRPF40B-216ENST00000552301 FBXO5Q9UKT4 447 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 CACNA1BQ00975 2339 aa18■□□□□ 0.47
PRPF40B-216ENST00000552301 OR5K3A6NET4 321 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 RRP8O43159 456 aaKnown RBP17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 NIPSNAP2O75323 286 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 C9P02748 559 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 CHRM3P20309 590 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 PRKG2Q13237 762 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 FAM92BQ6ZTR7 304 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 TBC1D21Q8IYX1 336 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 CERS2Q96G23 380 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 PRR11Q96HE9 360 aaPredicted RBP17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 C9orf72Q96LT7 481 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 BIRC8Q96P09 236 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 RAB33BQ9H082 229 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 HRASLS2Q9NWW9 162 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 EPHA6Q9UF33 1036 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 POLG2Q9UHN1 485 aa17.99■□□□□ 0.47
PRPF40B-216ENST00000552301 BPTFQ12830 3046 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 OR6C74A6NCV1 312 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 EFCAB7A8K855 629 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 BHMG1C9JSJ3 638 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 TOX3O15405 576 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 TLX3O43711 291 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 GPC4O75487 556 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 S1PR4O95977 384 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 ANKRD34CP0C6C1 535 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 ERVK-10P10266 1014 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 ACADLP28330 430 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 LEPRP48357 1165 aaKnown RBP17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 MPP1Q00013 466 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 DNTTIP2Q5QJE6 756 aaKnown RBP17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 PLEKHS1Q5SXH7 462 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 CACHD1Q5VU97 1274 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 DUPD1Q68J44 220 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 UNC5AQ6ZN44 842 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 LRRC69Q6ZNQ3 347 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 ARHGAP22Q7Z5H3 698 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 CLEC14AQ86T13 490 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 ANKMY2Q8IV38 441 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 IGDCC3Q8IVU1 814 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 UNC5BQ8IZJ1 945 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 OR4E2Q8NGC2 313 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 OR52E1Q8NGJ3 308 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 OR5AR1Q8NGP9 310 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 CFAP61Q8NHU2 1237 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 FAM136AQ96C01 138 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 FOPNLQ96NB1 174 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 CD180Q99467 661 aa17.98■□□□□ 0.47
PRPF40B-216ENST00000552301 TDRKHQ9Y2W6 561 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms