RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 THAP10Q9P2Z0 257 aaPredicted RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 FBXO2Q9UK22 296 aaPredicted RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 INTS6Q9UL03 887 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ODF2LQ9ULJ1 636 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 RCE1Q9Y256 329 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 B3GNT3Q9Y2A9 372 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 GOLGA4Q13439 2230 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 PI4KAP42356 2102 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 PLXND1Q9Y4D7 1925 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 KIAA1549LQ6ZVL6 1849 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 AKAP9Q99996 3911 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 NUMA1Q14980 2115 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 PDZD2O15018 2839 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 SH2D7A6NKC9 451 aaPredicted RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 CCDC169A6NNP5 214 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 F8VP50 259 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 H0Y626 953 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 H7C1Q1 480 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 I6L893 689 aaPredicted RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 CLDN5O00501 218 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 LAD1O00515 517 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 LATO43561 262 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 KLRC4O43908 158 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 REC8O95072 547 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 RTN3O95197 1032 aaPredicted RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 TRIM16O95361 564 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 BAG4O95429 457 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 KLF8O95600 359 aaPredicted RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 IGLV3-27P01718 113 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 FYNP06241 537 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 HNRNPCP07910 306 aaKnown RBP eCLIP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ALDOCP09972 364 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 CYP4B1P13584 511 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 APEHP13798 732 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 IGFBP2P18065 325 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 SCP2P22307 547 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 CCT6AP40227 531 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 STAT6P42226 847 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 RXRGP48443 463 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 RPL34P49207 117 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 TAF6P49848 677 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 NR1H2P55055 460 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 MFAP3P55082 362 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 NAP1L1P55209 391 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 CLDN6P56747 220 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 SLC37A1P57057 533 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 CYP4F2P78329 520 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 AKAP17AQ02040 695 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 NCBP1Q09161 790 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ABHD18Q0P651 414 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 TAF10Q12962 218 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 GRIK2Q13002 908 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 PLD1Q13393 1074 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 GAB1Q13480 694 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 CUL4AQ13619 759 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 KCNB1Q14721 858 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM132DQ14C87 1099 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 KARSQ15046 597 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 DUOXA1Q1HG43 343 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 KIF19Q2TAC6 998 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 LINC00303Q3SY05 128 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ANXA2RQ3ZCQ2 193 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 FUT11Q495W5 492 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 RAB41Q5JT25 222 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 MTFR2Q6P444 385 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 KIAA1324Q6UXG2 1013 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 DCDC5Q6ZRR9 648 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 C1orf122Q6ZSJ8 110 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 BCDIN3DQ7Z5W3 292 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ADGRG6Q86SQ4 1221 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ITIH5Q86UX2 942 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ADIPOR2Q86V24 386 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 CBWD2Q8IUF1 395 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ARMC8Q8IUR7 673 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 NAXDQ8IW45 347 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 UEVLDQ8IX04 471 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 C12orf56Q8IXR9 622 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 TMEM86AQ8N2M4 240 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF366Q8N895 744 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 TRIML1Q8N9V2 468 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 BEND2Q8NDZ0 799 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 TSTD1Q8NFU3 115 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 CEP76Q8TAP6 659 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ZCCHC10Q8TBK6 192 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 WFDC5Q8TCV5 224 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 SAP25Q8TEE9 199 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 NEU4Q8WWR8 484 aaPredicted RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 NCSTNQ92542 709 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 PIGKQ92643 395 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 RAD54LQ92698 747 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ATP2A3Q93084 1043 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 MYLPFQ96A32 169 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 OTUB2Q96DC9 234 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 RNF125Q96EQ8 232 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ALG14Q96F25 216 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 WBP1Q96G27 269 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 EPSTI1Q96J88 318 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 IFT74Q96LB3 600 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 GPR78Q96P69 363 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 FUZQ9BT04 418 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms