RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SGTAO43765 313 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 VPS4BO75351 444 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 SCRG1O75711 98 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 NDST3O95803 873 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 PTPN4P29074 926 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 PDHA2P29803 388 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 AKT1P31749 480 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 OTX2P32243 289 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 ADH7P40394 386 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 PREPP48147 710 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 ARL4DP49703 201 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 PGDP52209 483 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 RPL26P61254 145 aaKnown RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 ZBED6P86452 979 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 MC1RQ01726 317 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 HYAL2Q12891 473 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 XRCC4Q13426 336 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 SEMA5AQ13591 1074 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 PEX6Q13608 980 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 ATP1A4Q13733 1029 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 BRD3Q15059 726 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 PDK2Q15119 407 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 INPP5JQ15735 1006 aaPredicted RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 PLEKHN1Q494U1 663 aaPredicted RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 PLEKHS1Q5SXH7 462 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 AADACL2Q6P093 401 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 PRSS42Q7Z5A4 293 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 AMZ2Q86W34 360 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF567Q8N184 647 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 DTWD1Q8N5C7 304 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 CISD2Q8N5K1 135 aaKnown RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 C2orf73Q8N5S3 287 aaPredicted RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 RBMXL3Q8N7X1 1067 aaKnown RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 OR13C4Q8NGS5 318 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 TADA1Q96BN2 335 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 SLC41A2Q96JW4 573 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 C12orf66Q96MD2 445 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 TTC25Q96NG3 672 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 OLFM3Q96PB7 478 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 GBP4Q96PP9 640 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 RANBP9Q96S59 729 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 TIMM29Q9BSF4 260 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 ZSCAN5AQ9BUG6 496 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 FICDQ9BVA6 458 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 XPO4Q9C0E2 1151 aaKnown RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 SLC25A51Q9H1U9 297 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 TRIT1Q9H3H1 467 aaKnown RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 RMI1Q9H9A7 625 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 MAGEE1Q9HCI5 957 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 SOHLH2Q9NX45 425 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 GDF2Q9UK05 429 aaPredicted RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 PLAGL1Q9UM63 463 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 VPS4AQ9UN37 437 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 RPL26L1Q9UNX3 145 aaKnown RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 FARSAQ9Y285 508 aaKnown RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 LUC7L2Q9Y383 392 aaKnown RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 CSAG2Q9Y5P2 127 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 SEC16AO15027 2179 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 FBN2P35556 2912 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 DCHS2Q6V1P9 2916 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 POLQO75417 2590 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 A0A0A6YYK5 440 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 GLYATL1P3A0A0U1RQE8 302 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 GSAPA4D1B5 854 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 KRT87PA6NCN2 255 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 OR5K3A6NET4 321 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 ADARB2-AS1A8MUL3 147 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 TMEM150CB9EJG8 249 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 LDB2O43679 373 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 CST8O60676 142 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 PYGLP06737 847 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 CAPN1P07384 714 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 CBSLP0DN79 551 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 MTHFD1P11586 935 aaKnown RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 SLC2A4P14672 509 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 ST6GAL1P15907 406 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 COMTP21964 271 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 CA4P22748 312 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 MAN1A1P33908 653 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 CBSP35520 551 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 GTF2H3Q13889 308 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 IL11RAQ14626 422 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 UGT8Q16880 541 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 ASTE1Q2TB18 679 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 TEX44Q53QW1 395 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 FHL5Q5TD97 284 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 SLC9A4Q6AI14 798 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 PPP1R2P3Q6NXS1 205 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 JMJD6Q6NYC1 403 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 SPOCD1Q6ZMY3 1216 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 SLCO4C1Q6ZQN7 724 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 PID1Q7Z2X4 250 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 LRRC49Q8IUZ0 686 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 SRRM1Q8IYB3 904 aaKnown RBP6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 CFAP206Q8IYR0 622 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 ZBTB2Q8N680 514 aa6.65□□□□□ -1.34
PRPF40B-214ENST00000551320 AVL9Q8NBF6 648 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms