RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 C17orf62Q9BQA9 187 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 C11orf70Q9BRQ4 267 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 RASSF1Q9NS23 344 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 TRPS1Q9UHF7 1281 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 SERTAD3Q9UJW9 196 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 FAM237AA0A1B0GTK4 181 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 GSAPA4D1B5 854 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 BTN3A1O00481 513 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 GPR39O43194 453 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 KLK8O60259 260 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 OR2B3O76000 313 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 SIX3O95343 332 aaPredicted RBP12.92□□□□□ -0.34
SNRPF-203ENST00000551316 HBQ1P09105 142 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 PRR35P0CG20 571 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 ABOP16442 354 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 ERCC2P18074 760 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 HLA-DPA1P20036 260 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 CMA1P23946 247 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 HALP42357 657 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 GCGRP47871 477 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 PTP4A2Q12974 167 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 ZNF658Q5TYW1 1059 aaPredicted RBP12.92□□□□□ -0.34
SNRPF-203ENST00000551316 TRAPPC5Q8IUR0 188 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 FAM71AQ8IYT1 594 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 TAB3Q8N5C8 712 aaPredicted RBP12.92□□□□□ -0.34
SNRPF-203ENST00000551316 PROKR1Q8TCW9 393 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 SLC20A1Q8WUM9 679 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 KCTD15Q96SI1 283 aaPredicted RBP12.92□□□□□ -0.34
SNRPF-203ENST00000551316 SPATA16Q9BXB7 569 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 AP1M1Q9BXS5 423 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 COQ3Q9NZJ6 369 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 IL17CQ9P0M4 197 aa12.92□□□□□ -0.34
SNRPF-203ENST00000551316 DNAJC13O75165 2243 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 F12P00748 615 aaPredicted RBP12.91□□□□□ -0.34
SNRPF-203ENST00000551316 PYGMP11217 842 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 GPD1P21695 349 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 PRDX3P30048 256 aaKnown RBP12.91□□□□□ -0.34
SNRPF-203ENST00000551316 PPP2R2BQ00005 443 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 DSC2Q02487 901 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 RBBP7Q16576 425 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 FAM182AQ5T1J6 154 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 ARMC6Q6NXE6 501 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 DPY19L2P1Q6NXN4 242 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 WDR59Q6PJI9 974 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 TMTC1Q8IUR5 882 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 ULK2Q8IYT8 1036 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 LPCAT1Q8NF37 534 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 ANKRD20A12PQ8NF67 263 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 OR4E2Q8NGC2 313 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 LILRB4Q8NHJ6 448 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 SLC30A5Q8TAD4 765 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 PEBP4Q96S96 227 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 NUP85Q9BW27 656 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 TDRD1Q9BXT4 1180 aaKnown RBP12.91□□□□□ -0.34
SNRPF-203ENST00000551316 WWP1Q9H0M0 922 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 PDCL3Q9H2J4 239 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 KIR3DX1Q9H7L2 352 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 SYTL2Q9HCH5 934 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 DMRT3Q9NQL9 472 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 ETNK2Q9NVF9 386 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 DNAJC12Q9UKB3 198 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 RCOR1Q9UKL0 485 aa12.91□□□□□ -0.34
SNRPF-203ENST00000551316 MRPS2Q9Y399 296 aaKnown RBP12.91□□□□□ -0.34
SNRPF-203ENST00000551316 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.91□□□□□ -0.34
SNRPF-203ENST00000551316 GPR89AB7ZAQ6 455 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 EEF2KO00418 725 aaKnown RBP12.9□□□□□ -0.34
SNRPF-203ENST00000551316 ZSCAN9O15535 394 aaPredicted RBP12.9□□□□□ -0.34
SNRPF-203ENST00000551316 VEGFDO43915 354 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 CDK14O94921 469 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 ZRANB2O95218 330 aaKnown RBP eCLIP12.9□□□□□ -0.34
SNRPF-203ENST00000551316 HPP00738 406 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 SLC4A1P02730 911 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 RAF1P04049 648 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 GPR89BP0CG08 455 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 COX6A1P12074 109 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 PON1P27169 355 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 PBLDP30039 288 aaPredicted RBP12.9□□□□□ -0.34
SNRPF-203ENST00000551316 OGDHQ02218 1023 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 RNFT1Q5M7Z0 435 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 CAMKMTQ7Z624 323 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 CPSF7Q8N684 471 aaKnown RBP12.9□□□□□ -0.34
SNRPF-203ENST00000551316 METTL27Q8N6F8 245 aaPredicted RBP12.9□□□□□ -0.34
SNRPF-203ENST00000551316 ZFPM2Q8WW38 1151 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 RMDN2Q96LZ7 410 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 FRMD6Q96NE9 622 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 ZNF599Q96NL3 588 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 LYSMD1Q96S90 227 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 NT5MQ9NPB1 228 aa12.9□□□□□ -0.34
SNRPF-203ENST00000551316 OR5H15A6NDH6 313 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 FAM171A2A8MVW0 826 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 MAFKO60675 156 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 CRLF1O75462 422 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 MMP8P22894 467 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 XRCC4Q13426 336 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 PKP1Q13835 747 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 ISM2Q6H9L7 571 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 C16orf47Q6ZP98 133 aaPredicted RBP12.89□□□□□ -0.35
SNRPF-203ENST00000551316 RFX8Q6ZV50 586 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 CYP4V2Q6ZWL3 525 aaPredicted RBP12.89□□□□□ -0.35
SNRPF-203ENST00000551316 CD163Q86VB7 1156 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms