RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ESX1Q8N693 406 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 DNAAF3Q8N9W5 541 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 SIDT2Q8NBJ9 832 aaKnown RBP12.66□□□□□ -0.38
NPAS3-209ENST00000551008 TRIM58Q8NG06 486 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 OR4E2Q8NGC2 313 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 OR5AR1Q8NGP9 310 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 FLVCR1-AS1Q8TAF5 88 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 LRRC45Q96CN5 670 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 ZNF501Q96CX3 271 aaPredicted RBP12.66□□□□□ -0.38
NPAS3-209ENST00000551008 SGSM3Q96HU1 749 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 HGH1Q9BTY7 390 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 XKR8Q9H6D3 395 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 EIF2B3Q9NR50 452 aaKnown RBP12.66□□□□□ -0.38
NPAS3-209ENST00000551008 FGF21Q9NSA1 209 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 TREX1Q9NSU2 369 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 STARD5Q9NSY2 213 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 CROTQ9UKG9 612 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 CDYLQ9Y232 598 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 BTRCQ9Y297 605 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 MYO18BQ8IUG5 2567 aa12.66□□□□□ -0.38
NPAS3-209ENST00000551008 TNRC6AQ8NDV7 1962 aaKnown RBP12.65□□□□□ -0.38
NPAS3-209ENST00000551008 ANKRD12Q6UB98 2062 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 ST6GAL1P15907 406 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 NDUFS1P28331 727 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 NFKB2Q00653 900 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 CDC20Q12834 499 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 ABRQ12979 859 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 GPR19Q15760 415 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 PRAMEF17Q5VTA0 474 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 KLHL35Q6PF15 583 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 AFTPHQ6ULP2 937 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 PPP1R3BQ86XI6 285 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 KMT5CQ86Y97 462 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 SLC38A9Q8NBW4 561 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 STARD8Q92502 1023 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 TFGQ92734 400 aaPredicted RBP12.65□□□□□ -0.38
NPAS3-209ENST00000551008 ALS2CR12Q96Q35 445 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 FERD3LQ96RJ6 166 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 PITPNM3Q9BZ71 974 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 TFB2MQ9H5Q4 396 aaKnown RBP12.65□□□□□ -0.38
NPAS3-209ENST00000551008 CHRAC1Q9NRG0 131 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 ZKSCAN5Q9Y2L8 839 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 HEBP2Q9Y5Z4 205 aa12.65□□□□□ -0.38
NPAS3-209ENST00000551008 SPENQ96T58 3664 aaKnown RBP12.65□□□□□ -0.39
NPAS3-209ENST00000551008 NBASA2RRP1 2371 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 SLC9B1P1A6NJY1 282 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 ZNF891A8MT65 544 aaPredicted RBP12.64□□□□□ -0.39
NPAS3-209ENST00000551008 IQCF5A8MTL0 148 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 B8ZZF3 427 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 E7EVH7 732 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 LIN7AO14910 233 aaPredicted RBP12.64□□□□□ -0.39
NPAS3-209ENST00000551008 HCRTR1O43613 425 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 CEP104O60308 925 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 ZBTB11O95625 1053 aaPredicted RBP12.64□□□□□ -0.39
NPAS3-209ENST00000551008 GSTM1P09488 218 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 PRKAR1AP10644 381 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 PVRP15151 417 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 NMBRP28336 390 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 PRDX3P30048 256 aaKnown RBP12.64□□□□□ -0.39
NPAS3-209ENST00000551008 PEBP1P30086 187 aaKnown RBP12.64□□□□□ -0.39
NPAS3-209ENST00000551008 CCR7P32248 378 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 SESN2P58004 480 aaPredicted RBP12.64□□□□□ -0.39
NPAS3-209ENST00000551008 HSD11B2P80365 405 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 GSTM4Q03013 218 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 PRKG2Q13237 762 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 BRD3Q15059 726 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 C6orf15Q6UXA7 325 aaPredicted RBP12.64□□□□□ -0.39
NPAS3-209ENST00000551008 RASGRP3Q8IV61 690 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 REXO1L1PQ8IX06 675 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 RASGEF1CQ8N431 466 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 CCDC89Q8N998 374 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 ZSCAN1Q8NBB4 408 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 OR4L1Q8NH43 312 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 CT55Q8WUE5 264 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 LCN9Q8WX39 176 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 ELMO1Q92556 727 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 PEX13Q92968 403 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 MS4A14Q96JA4 679 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 TRIM56Q9BRZ2 755 aaKnown RBP12.64□□□□□ -0.39
NPAS3-209ENST00000551008 MENTQ9BUN1 341 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 TRIT1Q9H3H1 467 aaKnown RBP12.64□□□□□ -0.39
NPAS3-209ENST00000551008 KCNF1Q9H3M0 494 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 MVB12BQ9H7P6 319 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 LNPEPQ9UIQ6 1025 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 RARRES3Q9UL19 164 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 NEU2Q9Y3R4 380 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 COLEC10Q9Y6Z7 277 aa12.64□□□□□ -0.39
NPAS3-209ENST00000551008 PCM1Q15154 2024 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 UBA6A0AVT1 1052 aaPredicted RBP12.63□□□□□ -0.39
NPAS3-209ENST00000551008 H3BMH7 237 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 PYCARD-AS1I3L0S3 204 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 GPC4O75487 556 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 TMEM63AO94886 807 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 NTRK1P04629 796 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 MGAT1P26572 445 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 DLSTP36957 453 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 MAGEA6P43360 314 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 GABRA4P48169 554 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 LMAN1P49257 510 aa12.63□□□□□ -0.39
NPAS3-209ENST00000551008 BASP1P80723 227 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms