RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 RAD21L1Q9H4I0 556 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 FZD3Q9NPG1 666 aa5.26□□□□□ -1.57
CPSF6-206ENST00000550987 PIH1D3Q9NQM4 214 aaKnown RBP5.26□□□□□ -1.57
CPSF6-206ENST00000550987 LARSQ9P2J5 1176 aaKnown RBP5.26□□□□□ -1.57
CPSF6-206ENST00000550987 CRNNQ9UBG3 495 aaPredicted RBP5.26□□□□□ -1.57
CPSF6-206ENST00000550987 CGNL1Q0VF96 1302 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 CLSPNQ9HAW4 1339 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 PHIPQ8WWQ0 1821 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 TICRRQ7Z2Z1 1910 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 MAP2K7O14733 419 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 MDM4O15151 490 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 TLX3O43711 291 aaPredicted RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 IFNA2P01563 188 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 MAOAP21397 527 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 KCNA5P22460 613 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 HOXD9P28356 352 aaPredicted RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 STX2P32856 288 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 NF2P35240 595 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 CDH13P55290 713 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 P2RX3P56373 397 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 CSNK2A1P68400 391 aaPredicted RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 SIRPAP78324 504 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 DPTQ07507 201 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 FOXM1Q08050 763 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 DAZAP2Q15038 168 aaPredicted RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 FAM98BQ52LJ0 330 aaKnown RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 ODF2Q5BJF6 829 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 MANEAQ5SRI9 462 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 DCST1Q5T197 706 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 DCAF12L2Q5VW00 463 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 PAPD7Q5XG87 772 aaKnown RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 TMEM211Q6ICI0 200 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 DUS1LQ6P1R4 473 aaKnown RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 C11orf88Q6PI97 169 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 SLC2A7Q6PXP3 512 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 C19orf48Q6RUI8 117 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 PARM1Q6UWI2 310 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 SLC36A4Q6YBV0 504 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 YTHDF3Q7Z739 585 aaKnown RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 MFN1Q8IWA4 741 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 ADHFE1Q8IWW8 467 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 ZNF713Q8N859 430 aaPredicted RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 CNBD1Q8NA66 436 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 MIGA1Q8NAN2 632 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 CAMKVQ8NCB2 501 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 CSNK2A3Q8NEV1 391 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 ENGASEQ8NFI3 743 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 CFAP61Q8NHU2 1237 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 LPAR1Q92633 364 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 ERLEC1Q96DZ1 483 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 SPACA9Q96E40 222 aaPredicted RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 ZNF830Q96NB3 372 aaPredicted RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 SEMA3CQ99985 751 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 FAM129AQ9BZQ8 928 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 SEMA4CQ9C0C4 833 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 ST6GALNAC4Q9H4F1 302 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 ESRP2Q9H6T0 727 aaKnown RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 MAGIXQ9H6Y5 334 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 CATSPERBQ9H7T0 1116 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 CDC14AQ9UNH5 594 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 DMRT1Q9Y5R6 373 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 ZFP37Q9Y6Q3 630 aaPredicted RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 HEG1Q9ULI3 1381 aa5.25□□□□□ -1.57
CPSF6-206ENST00000550987 FBN1P35555 2871 aaKnown RBP5.25□□□□□ -1.57
CPSF6-206ENST00000550987 TTC21BQ7Z4L5 1316 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 TRAV34A0A0B4J273 112 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 A0A0B4J293 547 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 ZNF814B7Z6K7 855 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 MS4A18H0YCH9 400 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 ADAM10O14672 748 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 HS3ST1O14792 307 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 ZIC3O60481 467 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 PRAMEF11O60813 436 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 BCAR3O75815 825 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 RECQL5O94762 991 aaPredicted RBP5.24□□□□□ -1.57
CPSF6-206ENST00000550987 PENKP01210 267 aaPredicted RBP5.24□□□□□ -1.57
CPSF6-206ENST00000550987 CYP1A2P05177 515 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 PRLRP16471 622 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 TLX1P31314 330 aaPredicted RBP5.24□□□□□ -1.57
CPSF6-206ENST00000550987 ME1P48163 572 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 ZXDAP98168 799 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 MTX1Q13505 466 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 GPR18Q14330 331 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 MEP1AQ16819 746 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 DUSP6Q16828 381 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 RBPMS2Q6ZRY4 209 aaKnown RBP5.24□□□□□ -1.57
CPSF6-206ENST00000550987 PI4KAP1Q8N8J0 262 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 IQUBQ8NA54 791 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 GDAP1Q8TB36 358 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 FAM162AQ96A26 154 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 ORAI1Q96D31 301 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 CCDC114Q96M63 670 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 SMC6Q96SB8 1091 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 SLC25A23Q9BV35 468 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 CNGB3Q9NQW8 809 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 OLAHQ9NV23 265 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 SLC24A2Q9UI40 661 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 SNX5Q9Y5X3 404 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 POMT1Q9Y6A1 747 aa5.24□□□□□ -1.57
CPSF6-206ENST00000550987 FRMPD3Q5JV73 1810 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms