RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 PREPP48147 710 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 PRPSAP1Q14558 356 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 CCDC181Q5TID7 509 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 FAM198BQ6UWH4 519 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 CLIP3Q96DZ5 547 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 FERD3LQ96RJ6 166 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 TFB2MQ9H5Q4 396 aaKnown RBP21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 FAM96AQ9H5X1 160 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 COG4Q9H9E3 785 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 ARNT2Q9HBZ2 717 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 PCDHA13Q9Y5I0 950 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 SPTBP11277 2137 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 TNRC6AQ8NDV7 1962 aaKnown RBP21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 GSAPA4D1B5 854 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 TMEM150CB9EJG8 249 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 BTN3A1O00481 513 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 TMEM63AO94886 807 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 RBP3P10745 1247 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 ST6GAL1P15907 406 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 PTMSP20962 102 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 CTNNA1P35221 906 aaKnown RBP21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 CD151P48509 253 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 TMPRSS15P98073 1019 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 GPR33Q49SQ1 333 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 FAM69BQ5VUD6 431 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 CDKL3Q8IVW4 592 aaPredicted RBP21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 KLHDC8BQ8IXV7 354 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 SYTL1Q8IYJ3 562 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 TC2NQ8N9U0 490 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 NRTNQ99748 197 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 ACTR5Q9H9F9 607 aaPredicted RBP21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 ZDHHC3Q9NYG2 299 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 ZNF451Q9Y4E5 1061 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 PCDHA3Q9Y5H8 950 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 TEX15Q9BXT5 2789 aa21.05■□□□□ 0.96
SMARCC2-210ENST00000550519 SEC16AO15027 2179 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 TRBV5-4A0A0C4DH59 114 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 PJA2O43164 708 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 LDB2O43679 373 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 LMAN1P49257 510 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 VAV2P52735 878 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 ITGA1P56199 1179 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 EIF3EP60228 445 aaKnown RBP21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 FHL5Q5TD97 284 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 FDCSPQ8NFU4 85 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 OR52E1Q8NGJ3 308 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 SPATA13Q96N96 652 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 TRAPPC9Q96Q05 1148 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 TBL1YQ9BQ87 522 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 MVB12BQ9H7P6 319 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 FEZ2Q9UHY8 353 aaPredicted RBP21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 SERTAD3Q9UJW9 196 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 ICE1Q9Y2F5 2266 aa21.04■□□□□ 0.96
SMARCC2-210ENST00000550519 PRRC2CQ9Y520 2896 aaKnown RBP21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 NOTCH2Q04721 2471 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 IFRD1O00458 451 aaPredicted RBP21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 CCL22O00626 93 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 KCNN4O15554 427 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 STK10O94804 968 aaKnown RBP21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 CYP2A7P20853 494 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 PDHA2P29803 388 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 MC4RP32245 332 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 PTPN7P35236 360 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 CDKN1CP49918 316 aaPredicted RBP21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 RPA4Q13156 261 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 SARM1Q6SZW1 724 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 AMIGO1Q86WK6 493 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 ADGRF3Q8IZF5 1079 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 ZBTB2Q8N680 514 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 TMEM102Q8N9M5 508 aaPredicted RBP21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 GLIS1Q8NBF1 620 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 PHC3Q8NDX5 983 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 CCDC110Q8TBZ0 833 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 PPP1R2P1Q96PQ5 205 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 OSBPL8Q9BZF1 889 aa21.03■□□□□ 0.96
SMARCC2-210ENST00000550519 MACROD2A1Z1Q3 448 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 H7C0S8 307 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 MAP3K7O43318 606 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 DPM1O60762 260 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 AGFG2O95081 481 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 PVRP15151 417 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 ACRV1P26436 265 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 BOP1Q14137 746 aaKnown RBP21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 SPARCL1Q14515 664 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 NCF4Q15080 339 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 PTCHD3Q3KNS1 767 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 ZNF385CQ66K41 422 aaPredicted RBP21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 JMJD6Q6NYC1 403 aaPredicted RBP21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 DARS2Q6PI48 645 aaKnown RBP21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 CDHR3Q6ZTQ4 885 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 MED25Q71SY5 747 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 SERPINA9Q86WD7 417 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 HPS6Q86YV9 775 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 CCDC170Q8IYT3 715 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 Q8NA96 180 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 RNF214Q8ND24 703 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 TFGQ92734 400 aaPredicted RBP21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 DNAJC1Q96KC8 554 aaKnown RBP21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 FAM118BQ9BPY3 351 aa21.02■□□□□ 0.96
SMARCC2-210ENST00000550519 DPH2Q9BQC3 489 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms