RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 NDUFS3O75489 264 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 TNFSF15O95150 251 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 C9P02748 559 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 SLC35G4P0C7Q5 338 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 OR56A5P0C7T3 313 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 SLC2A4P14672 509 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 PGAM1P18669 254 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 RPS3P23396 243 aaKnown RBP eCLIP10.92□□□□□ -0.66
RAB5B-208ENST00000550283 HALP42357 657 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 TTPAP49638 278 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 EPHA4P54764 986 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 GPLD1P80108 840 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 HSPA14Q0VDF9 509 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 SRSF6Q13247 344 aaKnown RBP10.92□□□□□ -0.66
RAB5B-208ENST00000550283 GRB7Q14451 532 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 RBM20Q5T481 1227 aaKnown RBP10.92□□□□□ -0.66
RAB5B-208ENST00000550283 LYPLAL1Q5VWZ2 237 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 STEAP4Q687X5 459 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 TMEM71Q6P5X7 295 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 FAM92BQ6ZTR7 304 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 ARHGAP22Q7Z5H3 698 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 BMPERQ8N8U9 685 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.92□□□□□ -0.66
RAB5B-208ENST00000550283 OR10G6Q8NH81 332 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.92□□□□□ -0.66
RAB5B-208ENST00000550283 NXPE2Q96DL1 559 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 SLC46A1Q96NT5 459 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 TGM7Q96PF1 710 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 CARD6Q9BX69 1037 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 KIR3DX1Q9H7L2 352 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 APMAPQ9HDC9 416 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 DKK4Q9UBT3 224 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 PISDQ9UG56 409 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 DMGDHQ9UI17 866 aaKnown RBP10.92□□□□□ -0.66
RAB5B-208ENST00000550283 ICKQ9UPZ9 632 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 PSAT1Q9Y617 370 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 NBEAQ8NFP9 2946 aa10.92□□□□□ -0.66
RAB5B-208ENST00000550283 IGHV5-51A0A0C4DH38 117 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 MAGEB16A2A368 324 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 OR6C74A6NCV1 312 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 PLD2O14939 933 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 CAPN5O15484 640 aaPredicted RBP10.91□□□□□ -0.66
RAB5B-208ENST00000550283 DUX1O43812 170 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 C1QAP02745 245 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 FTH1P02794 183 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 OGNP20774 298 aaKnown RBP10.91□□□□□ -0.66
RAB5B-208ENST00000550283 ITPKBP27987 946 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 PEBP1P30086 187 aaKnown RBP10.91□□□□□ -0.66
RAB5B-208ENST00000550283 CAPZBP47756 277 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 SH3BP2P78314 561 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 ABRQ12979 859 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 PDIA2Q13087 525 aaKnown RBP10.91□□□□□ -0.66
RAB5B-208ENST00000550283 GBX1Q14549 363 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 HIF1AQ16665 826 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 LONRF1Q17RB8 773 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 TBC1D25Q3MII6 688 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 ACSBG2Q5FVE4 666 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 PTRHD1Q6GMV3 140 aaKnown RBP10.91□□□□□ -0.66
RAB5B-208ENST00000550283 WDR74Q6RFH5 385 aaPredicted RBP10.91□□□□□ -0.66
RAB5B-208ENST00000550283 CAPN12Q6ZSI9 719 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 PCGF5Q86SE9 256 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 KCNMB4Q86W47 210 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 FAM20CQ8IXL6 584 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 SLC22A15Q8IZD6 547 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 FBXO39Q8N4B4 442 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 FBXO36Q8NEA4 188 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 OR4E2Q8NGC2 313 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 OR52E1Q8NGJ3 308 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 WDR36Q8NI36 951 aaKnown RBP10.91□□□□□ -0.66
RAB5B-208ENST00000550283 WDR48Q8TAF3 677 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 FBXO25Q8TCJ0 367 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 TFGQ92734 400 aaPredicted RBP10.91□□□□□ -0.66
RAB5B-208ENST00000550283 AHCYL2Q96HN2 611 aaKnown RBP10.91□□□□□ -0.66
RAB5B-208ENST00000550283 NAF1Q96HR8 494 aaKnown RBP10.91□□□□□ -0.66
RAB5B-208ENST00000550283 C9orf72Q96LT7 481 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 RUNDC3BQ96NL0 473 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 TMEM74Q96NL1 305 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 IL17FQ96PD4 163 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 FERD3LQ96RJ6 166 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 NDNQ99608 321 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 CTRCQ99895 268 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 MENTQ9BUN1 341 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 SPHK1Q9NYA1 384 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 FBXO5Q9UKT4 447 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 ZFYVE26Q68DK2 2539 aa10.91□□□□□ -0.66
RAB5B-208ENST00000550283 CXorf49A8MYA2 514 aaPredicted RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 BTN3A1O00481 513 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 LIN7AO14910 233 aaPredicted RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 DXOO77932 396 aaKnown RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 SLCO2B1O94956 709 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 AHSGP02765 367 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 PKMP14618 531 aaKnown RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 AMD1P17707 334 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 POLR2CP19387 275 aaPredicted RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 BDKRB1P46663 353 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 CARSP49589 748 aaKnown RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 PPM1FP49593 454 aaPredicted RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 SEPHS1P49903 392 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 CLCN7P51798 805 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 KPNA2P52292 529 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms