RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 PRDX3P30048 256 aaKnown RBP13.18□□□□□ -0.3
TROAP-211ENST00000549891 HADHAP40939 763 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 PRLHRP49683 370 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 ITGA1P56199 1179 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 PTPRCAPQ14761 206 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 NCF4Q15080 339 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 LLGL1Q15334 1064 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 PRAMEF17Q5VTA0 474 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 SLC6A19Q695T7 634 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 LCN10Q6JVE6 187 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 FBXO38Q6PIJ6 1188 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 FAM198BQ6UWH4 519 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 GPR135Q8IZ08 494 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 OR1L3Q8NH93 324 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 LRRC45Q96CN5 670 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 HAUS1Q96CS2 278 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 RBM41Q96IZ5 413 aaKnown RBP13.18□□□□□ -0.3
TROAP-211ENST00000549891 PPM1MQ96MI6 270 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 FERD3LQ96RJ6 166 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 COPS8Q99627 209 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 CHP1Q99653 195 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 SMAD5Q99717 465 aaKnown RBP13.18□□□□□ -0.3
TROAP-211ENST00000549891 FICDQ9BVA6 458 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 MFRPQ9BY79 579 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 PITPNM3Q9BZ71 974 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 GBA3Q9H227 469 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 CASS4Q9NQ75 786 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 FKBPLQ9UIM3 349 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 CACNA1DQ01668 2161 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 hCG_1818297A0A087WSY0 165 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 CCDC66A2RUB6 948 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 AGAP14A8MT82 685 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 LCA5LO95447 670 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 ALPPP05187 535 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 ATP1B2P14415 290 aaPredicted RBP13.17□□□□□ -0.3
TROAP-211ENST00000549891 CD151P48509 253 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 PRPSAP1Q14558 356 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 EIF2S3LQ2VIR3 472 aaKnown RBP13.17□□□□□ -0.3
TROAP-211ENST00000549891 VWA5B1Q5TIE3 1220 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 HIST2H2BCQ6DN03 193 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 SARM1Q6SZW1 724 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 SNX20Q7Z614 316 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 DAAM2Q86T65 1068 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 HOOK3Q86VS8 718 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 KATNAL2Q8IYT4 538 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 IQCKQ8N0W5 287 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 NXPE1Q8N323 547 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 ZBTB2Q8N680 514 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 RBMXL3Q8N7X1 1067 aaKnown RBP13.17□□□□□ -0.3
TROAP-211ENST00000549891 Q8NA96 180 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 CLEC1AQ8NC01 280 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 PRR7Q8TB68 274 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 N4BP2L2Q92802 583 aaPredicted RBP13.17□□□□□ -0.3
TROAP-211ENST00000549891 FER1L6-AS2Q96M78 137 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 PPP1R2P1Q96PQ5 205 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 TFB2MQ9H5Q4 396 aaKnown RBP13.17□□□□□ -0.3
TROAP-211ENST00000549891 MVB12BQ9H7P6 319 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 LUZP4Q9P127 313 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 ALG6Q9Y672 507 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 ANKRD12Q6UB98 2062 aa13.17□□□□□ -0.3
TROAP-211ENST00000549891 FER1L5A0AVI2 2057 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 H7C0C1 242 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 BTN3A1O00481 513 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 DDX3YO15523 660 aaKnown RBP13.16□□□□□ -0.3
TROAP-211ENST00000549891 ZNF749O43361 778 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 SGTAO43765 313 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 MFAP3LO75121 409 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 STK10O94804 968 aaKnown RBP13.16□□□□□ -0.3
TROAP-211ENST00000549891 CAPN1P07384 714 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 GSTM1P09488 218 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 ST6GAL1P15907 406 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 ATP5OP48047 213 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 LMAN1P49257 510 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 HADHBP55084 474 aaKnown RBP13.16□□□□□ -0.3
TROAP-211ENST00000549891 XIAPP98170 497 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 GSTM4Q03013 218 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 RPA4Q13156 261 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 MRPL49Q13405 166 aaKnown RBP13.16□□□□□ -0.3
TROAP-211ENST00000549891 ATP1A4Q13733 1029 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 SSPNQ14714 243 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 PTCHD3Q3KNS1 767 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 GPR33Q49SQ1 333 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 PRR30Q53SZ7 412 aaPredicted RBP13.16□□□□□ -0.3
TROAP-211ENST00000549891 ZNF789Q5FWF6 425 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 CCDC181Q5TID7 509 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 RANBP10Q6VN20 620 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 AMIGO1Q86WK6 493 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 NAT14Q8WUY8 206 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.16□□□□□ -0.3
TROAP-211ENST00000549891 TRAPPC9Q96Q05 1148 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 COG4Q9H9E3 785 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 GPN3Q9UHW5 284 aaPredicted RBP13.16□□□□□ -0.3
TROAP-211ENST00000549891 AP1M2Q9Y6Q5 423 aa13.16□□□□□ -0.3
TROAP-211ENST00000549891 NUP210LQ5VU65 1888 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 A1L4Q6 167 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 APOC4-APOC2K7ER74 178 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 BTN3A3O00478 584 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 PEX12O00623 359 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 IPO13O94829 963 aaKnown RBP13.15□□□□□ -0.3
TROAP-211ENST00000549891 APOC2P02655 101 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms