RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 TMEM164Q5U3C3 297 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 INO80CQ6PI98 192 aaPredicted RBP9.51□□□□□ -0.89
HDAC7-229ENST00000549883 CCDC81Q6ZN84 652 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 NLRP9Q7RTR0 991 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 TRIM73Q86UV7 250 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 CREG2Q8IUH2 290 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 NAT8LQ8N9F0 302 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 ACVR1CQ8NER5 493 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 FAM136AQ96C01 138 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 ZDHHC12Q96GR4 267 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 SGSM3Q96HU1 749 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 PWWP2AQ96N64 755 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 B3GNT4Q9C0J1 378 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 KLHL25Q9H0H3 589 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 P2RY12Q9H244 342 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 SEMA5BQ9P283 1151 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 ICKQ9UPZ9 632 aa9.51□□□□□ -0.89
HDAC7-229ENST00000549883 LOC101059948A0A1B0GTJ6 334 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 KLHL33A6NCF5 533 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 SLC9B1P1A6NJY1 282 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 STMND1H3BQB6 276 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 IFRD1O00458 451 aaPredicted RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 LIN7AO14910 233 aaPredicted RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 POLR1CO15160 346 aaPredicted RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 TOX3O15405 576 aaPredicted RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 NIPSNAP2O75323 286 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 STK17BO94768 372 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 DLGAP3O95886 979 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 FTH1P02794 183 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 OR56A5P0C7T3 313 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 IVDP26440 423 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 MAGEA3P43357 314 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 CD151P48509 253 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 EIF3BP55884 814 aaKnown RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 MRPS25P82663 173 aaKnown RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 CDK16Q00536 496 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 HSPA14Q0VDF9 509 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 ABRQ12979 859 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 RPA4Q13156 261 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 LAMB3Q13751 1172 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 GPR19Q15760 415 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 MSS51Q4VC12 460 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 MANEAQ5SRI9 462 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 RNASEH2BQ5TBB1 312 aaKnown RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 PRAMEF17Q5VTA0 474 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 PAPD7Q5XG87 772 aaKnown RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 CASC4Q6P4E1 433 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 CEACAM20Q6UY09 585 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 CENPUQ71F23 418 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 OOSP2Q86WS3 158 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 FAM20CQ8IXL6 584 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 KLHL7Q8IXQ5 586 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 ADGRF3Q8IZF5 1079 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 CACNA2D3Q8IZS8 1091 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 OTUD6BQ8N6M0 293 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 MCUQ8NE86 351 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 SNRNP27Q8WVK2 155 aaKnown RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 LCN9Q8WX39 176 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 TTC9Q92623 222 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 PEX13Q92968 403 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 SLC41A2Q96JW4 573 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 SIGLEC10Q96LC7 697 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 BIRC8Q96P09 236 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 SERPINB12Q96P63 405 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 ASPSCR1Q9BZE9 553 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 SEMA4CQ9C0C4 833 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 SRMSQ9H3Y6 488 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 VPS37BQ9H9H4 285 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 AKIRIN1Q9H9L7 192 aaPredicted RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 MRM3Q9HC36 420 aaKnown RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 SPHK1Q9NYA1 384 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 IL17BQ9UHF5 180 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 TSR3Q9UJK0 312 aaKnown RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 POMT2Q9UKY4 750 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 RUVBL2Q9Y230 463 aaKnown RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 ASF1AQ9Y294 204 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 TDRKHQ9Y2W6 561 aaKnown RBP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.5□□□□□ -0.89
HDAC7-229ENST00000549883 COLEC10Q9Y6Z7 277 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 ANKRD12Q6UB98 2062 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 ATMQ13315 3056 aa9.5□□□□□ -0.89
HDAC7-229ENST00000549883 PCM1Q15154 2024 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 SEC16AO15027 2179 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 ZCWPW2A0A1B0GU75 182 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 UBA6A0AVT1 1052 aaPredicted RBP9.49□□□□□ -0.89
HDAC7-229ENST00000549883 GSAPA4D1B5 854 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 TLCD2A6NGC4 264 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 CES2O00748 559 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 PRMT5O14744 637 aaPredicted RBP9.49□□□□□ -0.89
HDAC7-229ENST00000549883 HCRTR1O43613 425 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 GPC4O75487 556 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 NDUFS3O75489 264 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 C1QL1O75973 258 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 KIAA0754O94854 1291 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 ST6GAL1P15907 406 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 TCP1P17987 556 aaKnown RBP9.49□□□□□ -0.89
HDAC7-229ENST00000549883 F8A1P23610 371 aa9.49□□□□□ -0.89
HDAC7-229ENST00000549883 CD82P27701 267 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms