RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ST6GAL1P15907 406 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 PREPP48147 710 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 CD97P48960 835 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 GSDMDP57764 484 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 RANBP10Q6VN20 620 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 TAS2R42Q7RTR8 314 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 SNX20Q7Z614 316 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 DSELQ8IZU8 1212 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 PHC3Q8NDX5 983 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 SPATA13Q96N96 652 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 CCM2Q9BSQ5 444 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 OSBPL8Q9BZF1 889 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 ACTR5Q9H9F9 607 aaPredicted RBP19.78■□□□□ 0.76
SSH1-207ENST00000547862 LATS2Q9NRM7 1088 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 C1GALT1Q9NS00 363 aa19.78■□□□□ 0.76
SSH1-207ENST00000547862 UTP20O75691 2785 aaKnown RBP19.78■□□□□ 0.76
SSH1-207ENST00000547862 SNRNP200O75643 2136 aaKnown RBP19.78■□□□□ 0.76
SSH1-207ENST00000547862 PCSK5Q92824 1860 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 SHANK1Q9Y566 2161 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 KLHL33A6NCF5 533 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 A6NL46 340 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 MEN1O00255 615 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 BTN3A3O00478 584 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 CTNNA1P35221 906 aaKnown RBP19.77■□□□□ 0.76
SSH1-207ENST00000547862 PRKG2Q13237 762 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 PLEKHS1Q5SXH7 462 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 IZUMO3Q5VZ72 239 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 FAM198BQ6UWH4 519 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 SERPINA9Q86WD7 417 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 SYTL1Q8IYJ3 562 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 TAB3Q8N5C8 712 aaPredicted RBP19.77■□□□□ 0.76
SSH1-207ENST00000547862 OR52E1Q8NGJ3 308 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 ZFPM2Q8WW38 1151 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 MFRPQ9BY79 579 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 TRIM5Q9C035 493 aa19.77■□□□□ 0.76
SSH1-207ENST00000547862 LUC7LQ9NQ29 371 aaKnown RBP19.77■□□□□ 0.76
SSH1-207ENST00000547862 MATN2O00339 956 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 ZNF185O15231 689 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 TMEM63AO94886 807 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 PDHA2P29803 388 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 PRDX3P30048 256 aaKnown RBP19.76■□□□□ 0.75
SSH1-207ENST00000547862 CYLC1P35663 651 aaPredicted RBP19.76■□□□□ 0.75
SSH1-207ENST00000547862 HADHAP40939 763 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 COPS2P61201 443 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 RAPSNQ13702 412 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 DEFB110Q30KQ9 67 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 PRR30Q53SZ7 412 aaPredicted RBP19.76■□□□□ 0.75
SSH1-207ENST00000547862 HIST2H2BCQ6DN03 193 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 TRIM73Q86UV7 250 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 CARFQ8N187 725 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 OR52A5Q9H2C5 316 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 VPS37BQ9H9H4 285 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 LRRC4CQ9HCJ2 640 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 PCMTD2Q9NV79 361 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 PIH1D1Q9NWS0 290 aaKnown RBP19.76■□□□□ 0.75
SSH1-207ENST00000547862 ZDHHC3Q9NYG2 299 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 TCFL5Q9UL49 500 aa19.76■□□□□ 0.75
SSH1-207ENST00000547862 USP9XQ93008 2570 aaPredicted RBP19.76■□□□□ 0.75
SSH1-207ENST00000547862 MAP3K7O43318 606 aa19.75■□□□□ 0.75
SSH1-207ENST00000547862 AGFG2O95081 481 aa19.75■□□□□ 0.75
SSH1-207ENST00000547862 PTMAP06454 111 aaKnown RBP19.75■□□□□ 0.75
SSH1-207ENST00000547862 ACRV1P26436 265 aa19.75■□□□□ 0.75
SSH1-207ENST00000547862 RORAP35398 523 aa19.75■□□□□ 0.75
SSH1-207ENST00000547862 BRD3Q15059 726 aa19.75■□□□□ 0.75
SSH1-207ENST00000547862 SKOR2Q2VWA4 1001 aaPredicted RBP19.75■□□□□ 0.75
SSH1-207ENST00000547862 ARHGEF18Q6ZSZ5 1173 aa19.75■□□□□ 0.75
SSH1-207ENST00000547862 HOOK3Q86VS8 718 aa19.75■□□□□ 0.75
SSH1-207ENST00000547862 CLDN19Q8N6F1 224 aa19.75■□□□□ 0.75
SSH1-207ENST00000547862 ADAMTS17Q8TE56 1095 aa19.75■□□□□ 0.75
SSH1-207ENST00000547862 N4BP2L2Q92802 583 aaPredicted RBP19.75■□□□□ 0.75
SSH1-207ENST00000547862 LRRC45Q96CN5 670 aa19.75■□□□□ 0.75
SSH1-207ENST00000547862 ACTR10Q9NZ32 417 aa19.75■□□□□ 0.75
SSH1-207ENST00000547862 PCDHGA9Q9Y5G4 932 aaKnown RBP19.75■□□□□ 0.75
SSH1-207ENST00000547862 RCCD1A6NED2 376 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 SOWAHDA6NJG2 315 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 AGAP14A8MT82 685 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 C2orf74A8MZ97 194 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 LDB2O43679 373 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 TPH1P17752 444 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 OTX2P32243 289 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 ITGA1P56199 1179 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 ATP1A4Q13733 1029 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 POU6F1Q14863 301 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 KYNUQ16719 465 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 ZNF789Q5FWF6 425 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 DENND5AQ6IQ26 1287 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 ZNF449Q6P9G9 518 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 SARM1Q6SZW1 724 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 ZNF517Q6ZMY9 492 aaPredicted RBP19.74■□□□□ 0.75
SSH1-207ENST00000547862 AMIGO1Q86WK6 493 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 FDCSPQ8NFU4 85 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 HEXDCQ8WVB3 486 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 LRFN5Q96NI6 719 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 NUDT9Q9BW91 350 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 NLNQ9BYT8 704 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 G3BP2Q9UN86 482 aaKnown RBP19.74■□□□□ 0.75
SSH1-207ENST00000547862 ZNF451Q9Y4E5 1061 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 PCDHA3Q9Y5H8 950 aa19.74■□□□□ 0.75
SSH1-207ENST00000547862 USP9YO00507 2555 aaPredicted RBP19.73■□□□□ 0.75
SSH1-207ENST00000547862 C9J4A7 227 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms