RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 ARPC5LQ9BPX5 153 aa5.4□□□□□ -1.54
LIMA1-203ENST00000547825 HEPHQ9BQS7 1158 aa5.4□□□□□ -1.54
LIMA1-203ENST00000547825 IL22Q9GZX6 179 aa5.4□□□□□ -1.54
LIMA1-203ENST00000547825 CDT1Q9H211 546 aa5.4□□□□□ -1.54
LIMA1-203ENST00000547825 DTLQ9NZJ0 730 aa5.4□□□□□ -1.54
LIMA1-203ENST00000547825 SPASTQ9UBP0 616 aa5.4□□□□□ -1.54
LIMA1-203ENST00000547825 UBIAD1Q9Y5Z9 338 aa5.4□□□□□ -1.54
LIMA1-203ENST00000547825 SH3PXD2BA1X283 911 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 MAGEB16A2A368 324 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 MYADML2A6NDP7 307 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 ACKR2O00590 384 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 TIAF1O95411 115 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 MYL3P08590 195 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 GNAO1P09471 354 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 FMO3P31513 532 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 SOAT1P35610 550 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 PRIM2P49643 509 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 DGKEP52429 567 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 MTPNP58546 118 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 ARPC4P59998 168 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 RELAQ04206 551 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 RAD51Q06609 339 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 CSTF3Q12996 717 aaKnown RBP5.4□□□□□ -1.55
LIMA1-203ENST00000547825 MED22Q15528 200 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 FBXO47Q5MNV8 452 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 POMZP3Q6PJE2 187 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 PIWIL3Q7Z3Z3 882 aaKnown RBP5.4□□□□□ -1.55
LIMA1-203ENST00000547825 THAP5Q7Z6K1 395 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 TLK2Q86UE8 772 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 CAND1Q86VP6 1230 aaKnown RBP5.4□□□□□ -1.55
LIMA1-203ENST00000547825 SLC22A9Q8IVM8 553 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 AMER2Q8N7J2 671 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 UXS1Q8NBZ7 420 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 PNPT1Q8TCS8 783 aaKnown RBP5.4□□□□□ -1.55
LIMA1-203ENST00000547825 HEXDCQ8WVB3 486 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 KLHL5Q96PQ7 755 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 CHCHD6Q9BRQ6 235 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 GPR63Q9BZJ6 419 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 EHD1Q9H4M9 534 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 ACTR8Q9H981 624 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 GOLGA2P5Q9HBQ8 144 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 SETD4Q9NVD3 440 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 C3orf18Q9UK00 162 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 EIF3LQ9Y262 564 aaKnown RBP5.4□□□□□ -1.55
LIMA1-203ENST00000547825 WDR37Q9Y2I8 494 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 KLHL20Q9Y2M5 609 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.4□□□□□ -1.55
LIMA1-203ENST00000547825 NOTOA8MTQ0 251 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 TMEM114B3SHH9 223 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 LOC110117498-PIK3R3F6TDL0 507 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 H0YC42 278 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 AURKAO14965 403 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 AZIN1O14977 448 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 HBP1O60381 514 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 SNAP29O95721 258 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 PENKP01210 267 aaPredicted RBP5.4□□□□□ -1.55
LIMA1-203ENST00000547825 GSTT2P0CG29 244 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 GSTT2BP0CG30 244 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 TAF6P49848 677 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 LIMK2P53671 638 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 SLC16A1P53985 500 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 RAB25P57735 213 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 MYBPC1Q00872 1141 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 MXD1Q05195 221 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 CDK5R2Q13319 367 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 MSLNQ13421 630 aaPredicted RBP5.4□□□□□ -1.55
LIMA1-203ENST00000547825 ZFP69Q49AA0 526 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 ZNF57Q68EA5 555 aaPredicted RBP5.4□□□□□ -1.55
LIMA1-203ENST00000547825 TRNP1Q6NT89 227 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 ZPBP2Q6X784 338 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 CYP4V2Q6ZWL3 525 aaPredicted RBP5.4□□□□□ -1.55
LIMA1-203ENST00000547825 TCEAL8Q8IYN2 117 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 ENKURQ8TC29 256 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 FRS2Q8WU20 508 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 CHTF18Q8WVB6 975 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 SIGLEC10Q96LC7 697 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 TEKT5Q96M29 485 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 TBL1YQ9BQ87 522 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 MRPL57Q9BQC6 102 aaKnown RBP5.4□□□□□ -1.55
LIMA1-203ENST00000547825 ZNF670Q9BS34 389 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 BEX2Q9BXY8 128 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 HIPK3Q9H422 1215 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 RHOJQ9H4E5 214 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 CYP3A43Q9HB55 503 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 TUBA8Q9NY65 449 aaPredicted RBP5.4□□□□□ -1.55
LIMA1-203ENST00000547825 ERAP1Q9NZ08 941 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 MPP6Q9NZW5 540 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 SH3BP4Q9P0V3 963 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 HSFX1Q9UBD0 423 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 CACNG4Q9UBN1 327 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 KLQ9UEF7 1012 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 ADGRE2Q9UHX3 823 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 SLC13A4Q9UKG4 626 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 ITGB1BP2Q9UKP3 347 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 KIAA1257Q9ULG3 409 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 DUSP12Q9UNI6 340 aa5.4□□□□□ -1.55
LIMA1-203ENST00000547825 SHROOM3Q8TF72 1996 aa5.39□□□□□ -1.55
LIMA1-203ENST00000547825 A0A1W2PPC1 479 aa5.39□□□□□ -1.55
LIMA1-203ENST00000547825 FUOMA2VDF0 154 aa5.39□□□□□ -1.55
LIMA1-203ENST00000547825 KRT87PA6NCN2 255 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms