RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 MCM9Q9NXL9 1143 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 ANKRD10Q9NXR5 420 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 TAS2R3Q9NYW6 316 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 NINJ2Q9NZG7 142 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 STK39Q9UEW8 545 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 OR14J1Q9UGF5 321 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 POLLQ9UGP5 575 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 PCDHGA1Q9Y5H4 931 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 PTPRTO14522 1441 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 TTC37Q6PGP7 1564 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 SYNJ2BP-COX16A0A087WUM0 186 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 RHODO00212 210 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 CLDN4O14493 209 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 ST8SIA3O43173 380 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 VEGFDO43915 354 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 TSPAN1O60635 241 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 RGS11O94810 467 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 ALPPP05187 535 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 ALPPL2P10696 532 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 ARF4P18085 180 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-210ENST00000547654 NR2F2P24468 414 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 TNFRSF8P28908 595 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 HOXA11P31270 313 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-210ENST00000547654 FASLGP48023 281 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 GFPT1Q06210 699 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-210ENST00000547654 PDK1Q15118 436 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 UGCGQ16739 394 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 PRTGQ2VWP7 1150 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 HFEQ30201 348 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 ANKDD1AQ495B1 522 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 ATP13A5Q4VNC0 1218 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 ZNF789Q5FWF6 425 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 MANEAQ5SRI9 462 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 GGNBP1Q5YKI7 109 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 TOM1L2Q6ZVM7 507 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 ZNF595Q8IYB9 648 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 ZDHHC23Q8IYP9 409 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 TBC1D21Q8IYX1 336 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 LRRC57Q8N9N7 239 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 UXS1Q8NBZ7 420 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 MCPH1Q8NEM0 835 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 DBF4BQ8NFT6 615 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 OR1J2Q8NGS2 313 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 EXD1Q8NHP7 514 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 SPATA18Q8TC71 538 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 HEXDCQ8WVB3 486 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 SNAPC3Q92966 411 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 SLC25A28Q96A46 364 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 VPS39Q96JC1 886 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 CLMNQ96JQ2 1002 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 LRRC3BQ96PB8 259 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 GTPBP2Q9BX10 602 aaKnown RBP4.16□□□□□ -1.74
SCAF11-210ENST00000547654 ZNF350Q9GZX5 532 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 LHPPQ9H008 270 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 FN3KQ9H479 309 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 MVB12BQ9H7P6 319 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 RNPEPL1Q9HAU8 725 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 HINT3Q9NQE9 182 aaKnown RBP4.16□□□□□ -1.74
SCAF11-210ENST00000547654 DDX4Q9NQI0 724 aaKnown RBP4.16□□□□□ -1.74
SCAF11-210ENST00000547654 CYSLTR2Q9NS75 346 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 PRMT7Q9NVM4 692 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-210ENST00000547654 DPP3Q9NY33 737 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 CYP39A1Q9NYL5 469 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 MSRB1Q9NZV6 116 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 PLEKHB1Q9UF11 243 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-210ENST00000547654 FBXL5Q9UKA1 691 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 AGO2Q9UKV8 859 aaKnown RBP4.16□□□□□ -1.74
SCAF11-210ENST00000547654 MTUS1Q9ULD2 1270 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 ITM2BQ9Y287 266 aa4.16□□□□□ -1.74
SCAF11-210ENST00000547654 RPH3AQ9Y2J0 694 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-210ENST00000547654 RRP15Q9Y3B9 282 aaKnown RBP4.16□□□□□ -1.74
SCAF11-210ENST00000547654 TRIP12Q14669 1992 aaPredicted RBP4.16□□□□□ -1.74
SCAF11-210ENST00000547654 PRG4Q92954 1404 aaPredicted RBP4.15□□□□□ -1.74
SCAF11-210ENST00000547654 ALKQ9UM73 1620 aa4.15□□□□□ -1.74
SCAF11-210ENST00000547654 C13orf42A0A1B0GVH6 325 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 A0A1W2PPC1 479 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 SLC9B1P1A6NJY1 282 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 EIF4E1BA6NMX2 242 aaKnown RBP4.15□□□□□ -1.75
SCAF11-210ENST00000547654 TRIM77I1YAP6 450 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 SLC28A2O43868 658 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 NDUFB4O95168 129 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 PGLSO95336 258 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 TRIM16O95361 564 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 NGFRP08138 427 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 GHRP10912 638 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 CCNA2P20248 432 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 WNT5AP41221 380 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 RABIFP47224 123 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 CAMLGP49069 296 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 CXCR3P49682 368 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 ATXN3P54252 364 aaPredicted RBP4.15□□□□□ -1.75
SCAF11-210ENST00000547654 SNRPEP62304 92 aaKnown RBP4.15□□□□□ -1.75
SCAF11-210ENST00000547654 CDO1Q16878 200 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 LRRC73Q5JTD7 316 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 KCNT1Q5JUK3 1230 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 RNASEH2BQ5TBB1 312 aaKnown RBP4.15□□□□□ -1.75
SCAF11-210ENST00000547654 METTL2BQ6P1Q9 378 aaKnown RBP4.15□□□□□ -1.75
SCAF11-210ENST00000547654 PAPD4Q6PIY7 484 aaKnown RBP4.15□□□□□ -1.75
SCAF11-210ENST00000547654 ENPP7Q6UWV6 458 aa4.15□□□□□ -1.75
SCAF11-210ENST00000547654 FAM57BQ71RH2 274 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms