RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PCDHB1Q9Y5F3 818 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 NINQ8N4C6 2090 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 ZFC3H1O60293 1989 aaKnown RBP12.47□□□□□ -0.41
SCAF11-209ENST00000547018 OTOL1A6NHN0 477 aaPredicted RBP12.47□□□□□ -0.41
SCAF11-209ENST00000547018 OLFM2O95897 454 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 OR56A5P0C7T3 313 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 ELFN1P0C7U0 828 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 NSG1P42857 185 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 MRPS35P82673 323 aaKnown RBP12.47□□□□□ -0.41
SCAF11-209ENST00000547018 CDKL1Q00532 357 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 IL1RL1Q01638 556 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 SELPLGQ14242 412 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 THEMIS2Q5TEJ8 643 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 ADNP2Q6IQ32 1131 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 IRGCQ6NXR0 463 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 FAM180BQ6P0A1 224 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 CYP20A1Q6UW02 462 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 ZBTB49Q6ZSB9 765 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 LIX1Q8N485 282 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
SCAF11-209ENST00000547018 PPP2R3CQ969Q6 453 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 VPS50Q96JG6 964 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 VCX3BQ9H321 246 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 BCAP29Q9UHQ4 241 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 ACOT8O14734 319 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 HTRA2O43464 458 aaPredicted RBP12.47□□□□□ -0.41
SCAF11-209ENST00000547018 OTCP00480 354 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 NRIP1P48552 1158 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 SPINT3P49223 89 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 DGKGP49619 791 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 CLCN4P51793 760 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 INHBCP55103 352 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 NFKB2Q00653 900 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 GRM2Q14416 872 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 ADIPOR2Q86V24 386 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 AP2M1Q96CW1 435 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 HEPHQ9BQS7 1158 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 SEZ6LQ9BYH1 1024 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 PKD2L2Q9NZM6 624 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 SLC8A2Q9UPR5 921 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 ERVW-1Q9UQF0 538 aa12.47□□□□□ -0.41
SCAF11-209ENST00000547018 K7ESM1 405 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 SAP18O00422 153 aaKnown RBP12.46□□□□□ -0.41
SCAF11-209ENST00000547018 TSPAN6O43657 245 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 LZTS3O60299 673 aaPredicted RBP12.46□□□□□ -0.41
SCAF11-209ENST00000547018 ANXA5P08758 320 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 SLC6A2P23975 617 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 PRKG2Q13237 762 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 NAE1Q13564 534 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 ADGRE1Q14246 886 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 DHCR24Q15392 516 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 ZIK1Q3SY52 487 aaPredicted RBP12.46□□□□□ -0.41
SCAF11-209ENST00000547018 SPANXN4Q5MJ08 99 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 TMEM240Q5SV17 173 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 ANGPTL8Q6UXH0 198 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 GCNT7Q6ZNI0 430 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 GALNT10Q86SR1 603 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 MMAAQ8IVH4 418 aaKnown RBP12.46□□□□□ -0.41
SCAF11-209ENST00000547018 NXPE3Q969Y0 559 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 ASB2Q96Q27 587 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 P2RY13Q9BPV8 354 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 DPY30Q9C005 99 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 CAAP1Q9H8G2 361 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 GID8Q9NWU2 228 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 NUDT4Q9NZJ9 180 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 PDE10AQ9Y233 779 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 GPR45Q9Y5Y3 372 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 LAMA1P25391 3075 aa12.46□□□□□ -0.41
SCAF11-209ENST00000547018 MAGEA13PA6NCF6 341 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 DFNA5O60443 496 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 MMP20O60882 483 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 MOSPD3O75425 235 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 CTSLP07711 333 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 FGF4P08620 206 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 LINGO3P0C6S8 592 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 UQCRBP14927 111 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 PDHA2P29803 388 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 BDKRB1P46663 353 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 GSK3BP49841 420 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 MEF2AQ02078 507 aaPredicted RBP12.46□□□□□ -0.42
SCAF11-209ENST00000547018 RBBP5Q15291 538 aaKnown RBP12.46□□□□□ -0.42
SCAF11-209ENST00000547018 TXNDC11Q6PKC3 985 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 GALNT7Q86SF2 657 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 RGL4Q8IZJ4 473 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 PROKR1Q8TCW9 393 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 GANCQ8TET4 914 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 ZNF483Q8TF39 744 aaPredicted RBP12.46□□□□□ -0.42
SCAF11-209ENST00000547018 CYGBQ8WWM9 190 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 ASB9Q96DX5 294 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 TRIM54Q9BYV2 358 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 POPDC3Q9HBV1 291 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 ZDHHC3Q9NYG2 299 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 CNTRLQ7Z7A1 2325 aa12.46□□□□□ -0.42
SCAF11-209ENST00000547018 GSTA4O15217 222 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 TULP3O75386 442 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 OR6B1O95007 311 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 OR4D2P58180 307 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 ZNF284Q2VY69 593 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 BLOC1S3Q6QNY0 202 aa12.45□□□□□ -0.42
SCAF11-209ENST00000547018 ZNF783Q6ZMS7 281 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms