RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PNCKQ6P2M8 343 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 DCDC5Q6ZRR9 648 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 CEP76Q8TAP6 659 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 NR4A3Q92570 626 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 C3orf14Q9HBI5 128 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 COPZ2Q9P299 210 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 UXTQ9UBK9 157 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-212ENST00000546744 CKLFQ9UBR5 152 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 INMT-MINDY4F8WBC2 141 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 ARFIP1P53367 373 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 SOX10P56693 466 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 PPP3R1P63098 170 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 SYT16Q17RD7 645 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 KCTD19Q17RG1 926 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-212ENST00000546744 GPR158Q5T848 1215 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 SCIMPQ6UWF3 145 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 DET1Q7L5Y6 550 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 TMEM192Q8IY95 271 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 PHTF2Q8N3S3 785 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 GAB3Q8WWW8 586 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 EXOC2Q96KP1 924 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 GON7Q9BXV9 100 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 TRIM2Q9C040 744 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 ATP13A3Q9H7F0 1226 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 PAK1IP1Q9NWT1 392 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-212ENST00000546744 PTTG3PQ9NZH4 202 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 CMAHPQ9Y471 501 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 COL5A3P25940 1745 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-212ENST00000546744 PLIN4Q96Q06 1357 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 DDTLA6NHG4 134 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-212ENST00000546744 SLC19A2O60779 497 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 COQ9O75208 318 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 EPORP19235 508 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 PRPS1L1P21108 318 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 CSTF2P33240 577 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTCH1-212ENST00000546744 SNAPC2Q13487 334 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 CAPSQ13938 189 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 MPP2Q14168 576 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 CTXN3Q4LDR2 81 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 TOMM5Q8N4H5 51 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 OR10G2Q8NGC3 310 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 DNAJA4Q8WW22 397 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-212ENST00000546744 ZNF486Q96H40 463 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-212ENST00000546744 UROC1Q96N76 676 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 TSSK3Q96PN8 268 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 COPS8Q99627 209 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 IPPKQ9H8X2 491 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 TESMINQ9Y4I5 508 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 ALG5Q9Y673 324 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 GADD45GO95257 159 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 S100GP29377 79 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 CXCL9Q07325 125 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 BIKQ13323 160 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 CLEC6AQ6EIG7 209 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 BAIAP2L2Q6UXY1 529 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 GDPGP1Q6ZNW5 385 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 AMIGO1Q86WK6 493 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 DCP2Q8IU60 420 aaKnown RBP12.6□□□□□ -0.39
PTCH1-212ENST00000546744 CARNMT1Q8N4J0 409 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 FIBCD1Q8N539 461 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 LGALS12Q96DT0 336 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 CCDC115Q96NT0 180 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 MARCH2Q9P0N8 246 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 PPP2R3BQ9Y5P8 575 aa12.6□□□□□ -0.39
PTCH1-212ENST00000546744 PRKYO43930 277 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 ARL6IP5O75915 188 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 DNTTP04053 509 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 USP17L7P0C7H9 530 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 CCR10P46092 362 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 TAS2R41P59536 307 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 DEFA5Q01523 94 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 PCLAFQ15004 111 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 AKIRIN2Q53H80 203 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 XKR6Q5GH73 641 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 HMBOX1Q6NT76 420 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 UTS2BQ765I0 119 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 UBQLNLQ8IYU4 475 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 ELMO1Q92556 727 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 RFT1Q96AA3 541 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 NTAN1Q96AB6 310 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 SENP8Q96LD8 212 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 PARK7Q99497 189 aaKnown RBP12.59□□□□□ -0.39
PTCH1-212ENST00000546744 TBC1D24Q9ULP9 559 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 PCDHGB7Q9Y5F8 929 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 MATN3O15232 486 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 MT-ND1P03886 318 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 IL32P24001 234 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 TCEA2Q15560 299 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 MINDY1Q8N5J2 469 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 PCDH19Q8TAB3 1148 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 DNAJB3Q8WWF6 145 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 CNDP2Q96KP4 475 aaKnown RBP12.59□□□□□ -0.39
PTCH1-212ENST00000546744 ZSCAN5AQ9BUG6 496 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 ADAM7Q9H2U9 754 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 PCDHA2Q9Y5H9 948 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 FAM47E-STBD1D6RA91 191 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 RPL9P32969 192 aaKnown RBP12.59□□□□□ -0.39
PTCH1-212ENST00000546744 CYP4F8P98187 520 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 ZNHIT3Q15649 155 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-212ENST00000546744 FAM189A2Q15884 450 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms