RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 MRPL38Q96DV4 380 aaKnown RBP11.71□□□□□ -0.53
CCDC38-202ENST00000546386 ABHD8Q96I13 439 aa11.71□□□□□ -0.53
CCDC38-202ENST00000546386 MAELQ96JY0 434 aaKnown RBP11.71□□□□□ -0.53
CCDC38-202ENST00000546386 TMEM74Q96NL1 305 aa11.71□□□□□ -0.53
CCDC38-202ENST00000546386 LYSMD1Q96S90 227 aa11.71□□□□□ -0.53
CCDC38-202ENST00000546386 MTERF1Q99551 399 aaKnown RBP11.71□□□□□ -0.53
CCDC38-202ENST00000546386 MRPL40Q9NQ50 206 aaKnown RBP11.71□□□□□ -0.53
CCDC38-202ENST00000546386 DYRK4Q9NR20 520 aa11.71□□□□□ -0.53
CCDC38-202ENST00000546386 INTS7Q9NVH2 962 aaKnown RBP11.71□□□□□ -0.53
CCDC38-202ENST00000546386 THG1LQ9NWX6 298 aaKnown RBP11.71□□□□□ -0.53
CCDC38-202ENST00000546386 MARK1Q9P0L2 795 aa11.71□□□□□ -0.53
CCDC38-202ENST00000546386 OPTCQ9UBM4 332 aa11.71□□□□□ -0.53
CCDC38-202ENST00000546386 HOXC11O43248 304 aaPredicted RBP11.71□□□□□ -0.54
CCDC38-202ENST00000546386 PRAMEF4O60810 478 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 PSMG1O95456 288 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 SOD1P00441 154 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 STATHP02808 62 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 THRAP10827 490 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 G6PDP11413 515 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 SLC2A4P14672 509 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 AOAHP28039 575 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 SYTL3Q4VX76 610 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.71□□□□□ -0.54
CCDC38-202ENST00000546386 PRAMEF9Q5VWM5 478 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 ANKRD54Q6NXT1 300 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 TRMT11Q7Z4G4 463 aaKnown RBP11.71□□□□□ -0.54
CCDC38-202ENST00000546386 KIAA0907Q7Z7F0 614 aaPredicted RBP11.71□□□□□ -0.54
CCDC38-202ENST00000546386 SUGP1Q8IWZ8 645 aaKnown RBP11.71□□□□□ -0.54
CCDC38-202ENST00000546386 FAM20CQ8IXL6 584 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 KRTCAP2Q8N6L1 136 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 POPDC3Q9HBV1 291 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 MBNL1Q9NR56 388 aaKnown RBP11.71□□□□□ -0.54
CCDC38-202ENST00000546386 DPP7Q9UHL4 492 aa11.71□□□□□ -0.54
CCDC38-202ENST00000546386 CORO1CQ9ULV4 474 aaPredicted RBP11.71□□□□□ -0.54
CCDC38-202ENST00000546386 SAP18O00422 153 aaKnown RBP11.7□□□□□ -0.54
CCDC38-202ENST00000546386 SLC31A1O15431 190 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 MAP3K7O43318 606 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 CIB2O75838 187 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 RPL38P63173 70 aaKnown RBP11.7□□□□□ -0.54
CCDC38-202ENST00000546386 NFKB2Q00653 900 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 CCNIQ14094 377 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 PON2Q15165 354 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 PDGFRLQ15198 375 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 SKIV2LQ15477 1246 aaKnown RBP11.7□□□□□ -0.54
CCDC38-202ENST00000546386 GPR33Q49SQ1 333 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 RABL3Q5HYI8 236 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 CES5AQ6NT32 575 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 NEK5Q6P3R8 708 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 MACC1Q6ZN28 852 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 OR56A4Q8NGH8 313 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 ZNF483Q8TF39 744 aaPredicted RBP11.7□□□□□ -0.54
CCDC38-202ENST00000546386 JPH3Q8WXH2 748 aaPredicted RBP11.7□□□□□ -0.54
CCDC38-202ENST00000546386 OR8D1Q8WZ84 308 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 GLYATL1Q969I3 302 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 ULK4Q96C45 1275 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 SIKE1Q9BRV8 207 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 TRMT61BQ9BVS5 477 aaKnown RBP11.7□□□□□ -0.54
CCDC38-202ENST00000546386 ACTR8Q9H981 624 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 EBF2Q9HAK2 575 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 LIMD1Q9UGP4 676 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 PLEKHM1Q9Y4G2 1056 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 POLR3HQ9Y535 204 aaPredicted RBP11.7□□□□□ -0.54
CCDC38-202ENST00000546386 STON1Q9Y6Q2 735 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 LRRK1Q38SD2 2015 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 TRBV23OR9-2A0A075B6M9 112 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 CHUKO15111 745 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 SLC16A8O95907 504 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 MT-ND1P03886 318 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 CYP2A6P11509 494 aaPredicted RBP11.7□□□□□ -0.54
CCDC38-202ENST00000546386 EPORP19235 508 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 IL12AP29459 219 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 HMOX2P30519 316 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 LTBRP36941 435 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 ADGRE1Q14246 886 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 ELAVL3Q14576 367 aaKnown RBP11.7□□□□□ -0.54
CCDC38-202ENST00000546386 STARD3Q14849 445 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 REP15Q6BDI9 236 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 DUS1LQ6P1R4 473 aaKnown RBP11.7□□□□□ -0.54
CCDC38-202ENST00000546386 ADAMTSL2Q86TH1 951 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 PHYKPLQ8IUZ5 450 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 BTN2A2Q8WVV5 523 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 OTUB2Q96DC9 234 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 EGLN2Q96KS0 407 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 TUBB6Q9BUF5 446 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 EBPLQ9BY08 206 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 TMEM245Q9H330 911 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 ZNF576Q9H609 170 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 ZNF385DQ9H6B1 395 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 ATXN10Q9UBB4 475 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 SLC23A2Q9UGH3 650 aa11.7□□□□□ -0.54
CCDC38-202ENST00000546386 CNOT6Q9ULM6 557 aaKnown RBP11.7□□□□□ -0.54
CCDC38-202ENST00000546386 TDRKHQ9Y2W6 561 aaKnown RBP11.7□□□□□ -0.54
CCDC38-202ENST00000546386 EME2A4GXA9 379 aaPredicted RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 SLCO1B7G3V0H7 640 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 H0Y8X5 98 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 ZNF8P17098 575 aaPredicted RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 PSMA3P25788 255 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 HALP42357 657 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 ADARP55265 1226 aaKnown RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 TRAF3Q13114 568 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms