RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ATXN7L2Q5T6C5 722 aaPredicted RBP14.42□□□□□ -0.1
HOXC11-202ENST00000546378 FAM45BPQ6NSW5 357 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 ZCCHC8Q6NZY4 707 aaKnown RBP14.42□□□□□ -0.1
HOXC11-202ENST00000546378 PGBD5Q8N414 524 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 LIX1Q8N485 282 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 FAM45AQ8TCE6 357 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 ZHX1-C8orf76Q96EF9 292 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 ZBTB18Q99592 522 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 AMBRA1Q9C0C7 1298 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 ATAD3AQ9NVI7 634 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 SLCO3A1Q9UIG8 710 aa14.42□□□□□ -0.1
HOXC11-202ENST00000546378 ZSWIM8A7E2V4 1837 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 BCKDKO14874 412 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 MTX2O75431 263 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 ERVPABLB-1P60509 514 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 TUBA4AP68366 448 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 GSTM4Q03013 218 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 MOGQ16653 247 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 OR4F6Q8NGB9 312 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 FBXO32Q969P5 355 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 HHIPL1Q96JK4 782 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 EGLN2Q96KS0 407 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 GPR63Q9BZJ6 419 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 CCSER2Q9H7U1 834 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 GKN1Q9NS71 199 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 GPC6Q9Y625 555 aaPredicted RBP14.41□□□□□ -0.1
HOXC11-202ENST00000546378 MBL2P11226 248 aaPredicted RBP14.41□□□□□ -0.1
HOXC11-202ENST00000546378 INAVAQ3KP66 663 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 C6orf141Q5SZD1 244 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 ZNF362Q5T0B9 420 aaPredicted RBP14.41□□□□□ -0.1
HOXC11-202ENST00000546378 ZNF773Q6PK81 442 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 TMC5Q6UXY8 1006 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 HMGN2P46Q86SG4 172 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 MCFD2Q8NI22 146 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 FAR1Q8WVX9 515 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 CDKN2AIPNLQ96HQ2 116 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 KCNC2Q96PR1 638 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 CGREF1Q99674 301 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 EHD1Q9H4M9 534 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 HMG20AQ9NP66 347 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 SLC6A13Q9NSD5 602 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 TREX1Q9NSU2 369 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 OGDHLQ9ULD0 1010 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 GMPPBQ9Y5P6 360 aa14.41□□□□□ -0.1
HOXC11-202ENST00000546378 A0A096LPI6 279 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 C16orf96A6NNT2 1141 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 RPL17P18621 184 aaKnown RBP14.4□□□□□ -0.1
HOXC11-202ENST00000546378 C21orf33P30042 268 aaPredicted RBP14.4□□□□□ -0.1
HOXC11-202ENST00000546378 MAGEA8P43361 318 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 LRRC74AQ0VAA2 488 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 KCNJ8Q15842 424 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 TAF12Q16514 161 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 FAM117BQ6P1L5 589 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 HORMAD1Q86X24 394 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 SIX5Q8N196 739 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 C10orf111Q8N326 155 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 PIK3C3Q8NEB9 887 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 FAM83FQ8NEG4 500 aaPredicted RBP14.4□□□□□ -0.1
HOXC11-202ENST00000546378 PROKR1Q8TCW9 393 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 ROPN1LQ96C74 230 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 BIRC8Q96P09 236 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 BOCQ9BWV1 1114 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 SMOC2Q9H3U7 446 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 FAM118AQ9NWS6 357 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 CPQQ9Y646 472 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 AQP12BA6NM10 295 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 TPD52L2O43399 206 aaKnown RBP14.4□□□□□ -0.1
HOXC11-202ENST00000546378 SERPINF2P08697 491 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 MCCD1P59942 119 aaPredicted RBP14.4□□□□□ -0.1
HOXC11-202ENST00000546378 CES5AQ6NT32 575 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 AQP12AQ8IXF9 295 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 STON2Q8WXE9 905 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 KCNN1Q92952 543 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 SH3YL1Q96HL8 342 aaPredicted RBP14.4□□□□□ -0.1
HOXC11-202ENST00000546378 ATG10Q9H0Y0 220 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 PDP1Q9P0J1 537 aaPredicted RBP14.4□□□□□ -0.1
HOXC11-202ENST00000546378 ZNF225Q9UK10 706 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 ERGIC3Q9Y282 383 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 LOC100130705A0A1B0GUX0 176 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 SNPHO15079 494 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 SH3BP5O60239 455 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 MT-ND2P03891 347 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 ITPKAP23677 461 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 LHX1P48742 406 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 HLCSP50747 726 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 BNIP2Q12982 314 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 P3H2Q8IVL5 708 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 SPPL2AQ8TCT8 520 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 LZICQ8WZA0 190 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 CORO1BQ9BR76 489 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 CINPQ9BW66 212 aaPredicted RBP14.4□□□□□ -0.1
HOXC11-202ENST00000546378 PARVBQ9HBI1 364 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 VPS28Q9UK41 221 aa14.4□□□□□ -0.1
HOXC11-202ENST00000546378 TAF4O00268 1085 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 VPS26AO75436 327 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 PTNP21246 168 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 SDHBP21912 280 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 OR1E2P47887 323 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 NKX3-2P78367 333 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 HSPA14Q0VDF9 509 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms