RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 Q8N9G6 341 aaPredicted RBP13.96□□□□□ -0.17
SRP54-202ENST00000546080 ZNF540Q8NDQ6 660 aa13.96□□□□□ -0.17
SRP54-202ENST00000546080 OR52E4Q8NGH9 312 aa13.96□□□□□ -0.17
SRP54-202ENST00000546080 RPL3LQ92901 407 aaKnown RBP13.96□□□□□ -0.17
SRP54-202ENST00000546080 FATE1Q969F0 183 aa13.96□□□□□ -0.17
SRP54-202ENST00000546080 TADA1Q96BN2 335 aa13.96□□□□□ -0.17
SRP54-202ENST00000546080 ZNF486Q96H40 463 aaPredicted RBP13.96□□□□□ -0.17
SRP54-202ENST00000546080 EPS8L2Q9H6S3 715 aa13.96□□□□□ -0.17
SRP54-202ENST00000546080 MED16Q9Y2X0 877 aa13.96□□□□□ -0.17
SRP54-202ENST00000546080 ASB1Q9Y576 335 aa13.96□□□□□ -0.17
SRP54-202ENST00000546080 ANKRD28O15084 1053 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 TBX1O43435 398 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 RGS10O43665 173 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 NDUFS3O75489 264 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 CAPN1P07384 714 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 SMPD1P17405 629 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 AKT1P31749 480 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 TGFBR1P36897 503 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 NR4A2P43354 598 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 MLLT6P55198 1093 aaPredicted RBP13.96□□□□□ -0.18
SRP54-202ENST00000546080 HUNKP57058 714 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 IFITM2Q01629 132 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 NRG1Q02297 640 aaPredicted RBP13.96□□□□□ -0.18
SRP54-202ENST00000546080 SIM2Q14190 667 aaPredicted RBP13.96□□□□□ -0.18
SRP54-202ENST00000546080 AP5B1Q2VPB7 878 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 ZNF792Q3KQV3 632 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 DNAJC14Q6Y2X3 702 aaPredicted RBP13.96□□□□□ -0.18
SRP54-202ENST00000546080 GPSM1Q86YR5 675 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 MICU2Q8IYU8 434 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 TEX26Q8N6G2 289 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 C3orf58Q8NDZ4 430 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 BRSK1Q8TDC3 778 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 SEMA3CQ99985 751 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 IKZF5Q9H5V7 419 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 ACOT13Q9NPJ3 140 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 DCAF13Q9NV06 445 aaKnown RBP13.96□□□□□ -0.18
SRP54-202ENST00000546080 AASSQ9UDR5 926 aa13.96□□□□□ -0.18
SRP54-202ENST00000546080 ANKRD12Q6UB98 2062 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 FAM20BO75063 409 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 CREG1O75629 220 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 GJB3O75712 270 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 SERPINA1P01009 418 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 RETP07949 1114 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 CD36P16671 472 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 HK3P52790 923 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 FCGRTP55899 365 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 CXCR4P61073 352 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 KEAP1Q14145 624 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 MAPKAPK3Q16644 382 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 PLEKHG6Q3KR16 790 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 COLEC12Q5KU26 742 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 PIK3R6Q5UE93 754 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 GPR149Q86SP6 731 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 CLIP4Q8N3C7 705 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 GTF2H4Q92759 462 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 CDKN2AIPNLQ96HQ2 116 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 SH3GL1Q99961 368 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 PARVBQ9HBI1 364 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 CCNB1IP1Q9NPC3 277 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 GMPPBQ9Y5P6 360 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 ILVBLA1L0T0 632 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 MEIS3P2A8K0S8 358 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 TAF4O00268 1085 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 CXCL11O14625 94 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 DYRK3O43781 588 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 KCNK2O95069 426 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 HOXD8P13378 290 aaPredicted RBP13.95□□□□□ -0.18
SRP54-202ENST00000546080 RHOQP17081 205 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 CLK1P49759 484 aaKnown RBP13.95□□□□□ -0.18
SRP54-202ENST00000546080 PGFP49763 221 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 TRAF3Q13114 568 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 FADDQ13158 208 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 KIAA0040Q15053 153 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 ZNF404Q494X3 552 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 RFTN2Q52LD8 501 aaPredicted RBP13.95□□□□□ -0.18
SRP54-202ENST00000546080 STEAP3Q658P3 488 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 LAIR1Q6GTX8 287 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 CAPN13Q6MZZ7 669 aaPredicted RBP13.95□□□□□ -0.18
SRP54-202ENST00000546080 TUBA3EQ6PEY2 450 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 SHQ1Q6PI26 577 aaKnown RBP13.95□□□□□ -0.18
SRP54-202ENST00000546080 DPP9Q86TI2 863 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 YME1L1Q96TA2 773 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 RTP3Q9BQQ7 232 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 ZYG11BQ9C0D3 744 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 KATNBL1Q9H079 304 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 DCSTAMPQ9H295 470 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 TMLHEQ9NVH6 421 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 TRMT6Q9UJA5 497 aaKnown RBP13.95□□□□□ -0.18
SRP54-202ENST00000546080 PKP3Q9Y446 797 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 UGT2A1Q9Y4X1 527 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 HSPE1-MOB4S4R3N1 261 aa13.95□□□□□ -0.18
SRP54-202ENST00000546080 OTOFQ9HC10 1997 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 CLDN24A6NM45 220 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 VPS26AO75436 327 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 RECQL5O94762 991 aaPredicted RBP13.94□□□□□ -0.18
SRP54-202ENST00000546080 THP07101 528 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 BMP1P13497 986 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 CASP3P42574 277 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 NRIP1P48552 1158 aa13.94□□□□□ -0.18
SRP54-202ENST00000546080 TRPC1P48995 793 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms