RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 AADACL2Q6P093 401 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 CYB5D1Q6P9G0 228 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 CLEC18BQ6UXF7 455 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 ASB18Q6ZVZ8 466 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 OOSP2Q86WS3 158 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 APLFQ8IW19 511 aaPredicted RBP8.24□□□□□ -1.09
USP28-215ENST00000545608 TEX19Q8NA77 164 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 SLC38A9Q8NBW4 561 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 CLEC18CQ8NCF0 446 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 OR4E2Q8NGC2 313 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 ZFPM2Q8WW38 1151 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 MIB2Q96AX9 1013 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 MRRFQ96E11 262 aaKnown RBP8.24□□□□□ -1.09
USP28-215ENST00000545608 LINC00615Q96LM1 132 aaPredicted RBP8.24□□□□□ -1.09
USP28-215ENST00000545608 NRTNQ99748 197 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 FAM118BQ9BPY3 351 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 KIR3DX1Q9H7L2 352 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 KCND1Q9NSA2 647 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 FARSAQ9Y285 508 aaKnown RBP8.24□□□□□ -1.09
USP28-215ENST00000545608 MAN2B2Q9Y2E5 1009 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.24□□□□□ -1.09
USP28-215ENST00000545608 PCDHA3Q9Y5H8 950 aa8.24□□□□□ -1.09
USP28-215ENST00000545608 KLHL33A6NCF5 533 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 SLC9B1P1A6NJY1 282 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 KCNN4O15554 427 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 SCRG1O75711 98 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 ZBTB11O95625 1053 aaPredicted RBP8.23□□□□□ -1.09
USP28-215ENST00000545608 IL2RAP01589 272 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 SLC35G4P0C7Q5 338 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 PRSS56P0CW18 603 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 RBP3P10745 1247 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 NDUFS1P28331 727 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 CTNNA1P35221 906 aaKnown RBP8.23□□□□□ -1.09
USP28-215ENST00000545608 CD97P48960 835 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 PRLHRP49683 370 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 CDKN1CP49918 316 aaPredicted RBP8.23□□□□□ -1.09
USP28-215ENST00000545608 ZNF140P52738 457 aaPredicted RBP8.23□□□□□ -1.09
USP28-215ENST00000545608 EIF3EP60228 445 aaKnown RBP8.23□□□□□ -1.09
USP28-215ENST00000545608 RPS15P62841 145 aaKnown RBP8.23□□□□□ -1.09
USP28-215ENST00000545608 TUBB4BP68371 445 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 CHAF1BQ13112 559 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 IL10RAQ13651 578 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 TUBB2AQ13885 445 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 KRT33BQ14525 404 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 PRPSAP1Q14558 356 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 UGT8Q16880 541 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 PLEKHS1Q5SXH7 462 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 CPZQ66K79 652 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 DARS2Q6PI48 645 aaKnown RBP8.23□□□□□ -1.09
USP28-215ENST00000545608 ZNF517Q6ZMY9 492 aaPredicted RBP8.23□□□□□ -1.09
USP28-215ENST00000545608 TMEM126BQ8IUX1 230 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 NXPE1Q8N323 547 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 PHC3Q8NDX5 983 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 CCDC110Q8TBZ0 833 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 MR1Q95460 341 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 TRIM44Q96DX7 344 aaPredicted RBP8.23□□□□□ -1.09
USP28-215ENST00000545608 DCUN1D1Q96GG9 259 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 FERD3LQ96RJ6 166 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 CCM2Q9BSQ5 444 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 TUBB2BQ9BVA1 445 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 TLR10Q9BXR5 811 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 GPR87Q9BY21 358 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 OSBPL8Q9BZF1 889 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 CHST8Q9H2A9 424 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 CRLS1Q9UJA2 301 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 BTRCQ9Y297 605 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 AAR2Q9Y312 384 aaKnown RBP8.23□□□□□ -1.09
USP28-215ENST00000545608 DUSP10Q9Y6W6 482 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 COLEC10Q9Y6Z7 277 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 DOPEY2Q9Y3R5 2298 aa8.23□□□□□ -1.09
USP28-215ENST00000545608 C17orf113A0A1B0GUU1 675 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 MACROD2A1Z1Q3 448 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 SERTM1A2A2V5 107 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 CCDC66A2RUB6 948 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 ARGFXA6NJG6 315 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 MEN1O00255 615 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 BTN3A3O00478 584 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 PJA2O43164 708 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 LDB2O43679 373 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 CPNE3O75131 537 aaKnown RBP8.22□□□□□ -1.09
USP28-215ENST00000545608 CRTAMO95727 393 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 PYGMP11217 842 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 RALBP11234 206 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 ATP1B2P14415 290 aaPredicted RBP8.22□□□□□ -1.09
USP28-215ENST00000545608 TPH1P17752 444 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 ITGALP20701 1170 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 CDH3P22223 829 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 CTNNA2P26232 953 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 PDHA2P29803 388 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 PRDX3P30048 256 aaKnown RBP8.22□□□□□ -1.09
USP28-215ENST00000545608 MC4RP32245 332 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 CYLC1P35663 651 aaPredicted RBP8.22□□□□□ -1.09
USP28-215ENST00000545608 CCL11P51671 97 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 PDE1BQ01064 536 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 ABRQ12979 859 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 SPA17Q15506 151 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 ZNF658BQ4V348 819 aaPredicted RBP8.22□□□□□ -1.09
USP28-215ENST00000545608 ZNF789Q5FWF6 425 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 TMTC4Q5T4D3 741 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 FAM69BQ5VUD6 431 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms