RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 IFNB1P01574 187 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 ETS1P14921 441 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 NSG1P42857 185 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 CD151P48509 253 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 RPA4Q13156 261 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 SEMA5AQ13591 1074 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 BOP1Q14137 746 aaKnown RBP20.52■□□□□ 0.88
SCARB1-210ENST00000545493 ERV3-1Q14264 604 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 KRT33BQ14525 404 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 SIX1Q15475 284 aaPredicted RBP20.52■□□□□ 0.88
SCARB1-210ENST00000545493 ATG14Q6ZNE5 492 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 LINC00523Q86TU6 105 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 TMEM135Q86UB9 458 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 PTRH1Q86Y79 214 aaKnown RBP20.52■□□□□ 0.88
SCARB1-210ENST00000545493 LCN9Q8WX39 176 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 FRMD8P1Q9BZ68 369 aaPredicted RBP20.52■□□□□ 0.88
SCARB1-210ENST00000545493 SRMSQ9H3Y6 488 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 SLC2A6Q9UGQ3 507 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 KCND3Q9UK17 655 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 PADI1Q9ULC6 663 aa20.52■□□□□ 0.88
SCARB1-210ENST00000545493 FLNBO75369 2602 aaKnown RBP20.51■□□□□ 0.87
SCARB1-210ENST00000545493 C21orf140B9A014 251 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 MATN2O00339 956 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 KATNA1O75449 491 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 SCRG1O75711 98 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 WISP1O95388 367 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 GSTM1P09488 218 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 CCNYL3P0C7X3 344 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 CDH3P22223 829 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 FDFT1P37268 417 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 GSTM4Q03013 218 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 ABRQ12979 859 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 PRKAA1Q13131 559 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 LAMB3Q13751 1172 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 BPHLQ86WA6 291 aaPredicted RBP20.51■□□□□ 0.87
SCARB1-210ENST00000545493 DNAAF3Q8N9W5 541 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 C9orf43Q8TAL5 461 aaPredicted RBP20.51■□□□□ 0.87
SCARB1-210ENST00000545493 APOBEC4Q8WW27 367 aaKnown RBP20.51■□□□□ 0.87
SCARB1-210ENST00000545493 PITPNM3Q9BZ71 974 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 ACTL8Q9H568 366 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 TFB2MQ9H5Q4 396 aaKnown RBP20.51■□□□□ 0.87
SCARB1-210ENST00000545493 MVB12BQ9H7P6 319 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 KCNMB2Q9Y691 235 aa20.51■□□□□ 0.87
SCARB1-210ENST00000545493 HEATR9A2RTY3 570 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 SLC9B1P1A6NJY1 282 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 KRT86O43790 486 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 CREG1O75629 220 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 ST6GAL1P15907 406 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 STIP1P31948 543 aaKnown RBP20.5■□□□□ 0.87
SCARB1-210ENST00000545493 RPS18P62269 152 aaKnown RBP20.5■□□□□ 0.87
SCARB1-210ENST00000545493 ACVR1Q04771 509 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 GPS2Q13227 327 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 SKIDA1Q1XH10 827 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 ZNF789Q5FWF6 425 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 MEI1Q5TIA1 1274 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 PRAMEF17Q5VTA0 474 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 FAM199XQ6PEV8 388 aaPredicted RBP20.5■□□□□ 0.87
SCARB1-210ENST00000545493 AFTPHQ6ULP2 937 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 PPP1R21Q6ZMI0 780 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 ZNF534Q76KX8 674 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 TMEM126BQ8IUX1 230 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 SLC38A9Q8NBW4 561 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 PHC3Q8NDX5 983 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 TFGQ92734 400 aaPredicted RBP20.5■□□□□ 0.87
SCARB1-210ENST00000545493 ZNF778Q96MU6 729 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 ALS2CR12Q96Q35 445 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 RANBP9Q96S59 729 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 XKR8Q9H6D3 395 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 CASS4Q9NQ75 786 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 ZNF71Q9NQZ8 489 aaPredicted RBP20.5■□□□□ 0.87
SCARB1-210ENST00000545493 LATS2Q9NRM7 1088 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 C1GALT1Q9NS00 363 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 ICKQ9UPZ9 632 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 ZNF148Q9UQR1 794 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 PCDHB3Q9Y5E6 796 aa20.5■□□□□ 0.87
SCARB1-210ENST00000545493 CDC14CA4D256 554 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 GOLGA6L6A8MZA4 724 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 LIN7AO14910 233 aaPredicted RBP20.49■□□□□ 0.87
SCARB1-210ENST00000545493 OR1I1O60431 355 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 GOT2P00505 430 aaKnown RBP20.49■□□□□ 0.87
SCARB1-210ENST00000545493 PRDX3P30048 256 aaKnown RBP20.49■□□□□ 0.87
SCARB1-210ENST00000545493 PRKG2Q13237 762 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 SNX1Q13596 522 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 TMTC4Q5T4D3 741 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 TSTD2Q5T7W7 516 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 NAPRTQ6XQN6 538 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 AMIGO1Q86WK6 493 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 ADGRF3Q8IZF5 1079 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 OR5AR1Q8NGP9 310 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 ELMO1Q92556 727 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 ABHD17AQ96GS6 310 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 TWSG1Q9GZX9 223 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 EPN3Q9H201 632 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 CLMPQ9H6B4 373 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 RAB6BQ9NRW1 208 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 KCND1Q9NSA2 647 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 RIMKLBQ9ULI2 386 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 POLHQ9Y253 713 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 TCAF1Q9Y4C2 921 aa20.49■□□□□ 0.87
SCARB1-210ENST00000545493 SLC5A10A0PJK1 596 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms