RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 PAFAH1B1P43034 410 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 RAD52P43351 418 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 ARF3P61204 181 aaPredicted RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 ARF1P84077 181 aaKnown RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 TIAL1Q01085 375 aaKnown RBP eCLIP6.15□□□□□ -1.425e-6■■■■□ 21
CPSF7-222ENST00000544585 INCA1Q0VD86 236 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 GALNT2Q10471 571 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 DYRK1AQ13627 763 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 MEA1Q16626 185 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 KNOP1Q1ED39 458 aaKnown RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 RBM20Q5T481 1227 aaKnown RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 C9orf64Q5T6V5 341 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 FAM102AQ5T9C2 384 aaPredicted RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 DEPDC1Q5TB30 811 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 FAM205BPQ63HN1 556 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 PM20D1Q6GTS8 502 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 MSANTD2Q6P1R3 559 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 SCARA5Q6ZMJ2 495 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 R3HCC1LQ7Z5L2 792 aaKnown RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 MMAAQ8IVH4 418 aaKnown RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 GSPT2Q8IYD1 628 aaKnown RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 LGI4Q8N135 537 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 SLC25A45Q8N413 288 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 D2HGDHQ8N465 521 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 OR4C6Q8NH72 309 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 RNF139Q8WU17 664 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 TMEM174Q8WUU8 243 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 JAKMIP2Q96AA8 810 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 KTI12Q96EK9 354 aaPredicted RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 REXO5Q96IC2 774 aaKnown RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 VCPIP1Q96JH7 1222 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 NEU1Q99519 415 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 SEMA3CQ99985 751 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 CCDC68Q9H2F9 335 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 SERHL2Q9H4I8 314 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 ABCC13Q9NSE7 274 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 HSF4Q9ULV5 492 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 CLIC4Q9Y696 253 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 UBE4BO95155 1302 aa6.15□□□□□ -1.43
CPSF7-222ENST00000544585 AHCTF1Q8WYP5 2266 aa6.15□□□□□ -1.43
CPSF7-222ENST00000544585 MYH10P35580 1976 aa6.15□□□□□ -1.43
CPSF7-222ENST00000544585 PRAMEF33A0A0G2JMD5 474 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 EDDM13A0A1B0GTR0 161 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 PVALEFA0A1B0GWK0 134 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 TYW5A2RUC4 315 aaKnown RBP6.14□□□□□ -1.43
CPSF7-222ENST00000544585 LRRIQ3A6PVS8 624 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-222ENST00000544585 PRAMEF26H0Y7S4 382 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 SLC7A4O43246 635 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 PRAMEF10O60809 474 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 TBL1XO60907 577 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 AFPP02771 609 aaKnown RBP6.14□□□□□ -1.43
CPSF7-222ENST00000544585 CSF1P09603 554 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 CD19P15391 556 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 DGKAP23743 735 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 MSX2P35548 267 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-222ENST00000544585 CASP4P49662 377 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 TKTL1P51854 596 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 RPS7P62081 194 aaKnown RBP6.14□□□□□ -1.43
CPSF7-222ENST00000544585 RPP30P78346 268 aaKnown RBP6.14□□□□□ -1.43
CPSF7-222ENST00000544585 CCDC15Q0P6D6 951 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 FHL3Q13643 280 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 ERV3-1Q14264 604 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 CLCA4Q14CN2 919 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 SLC39A14Q15043 492 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 RABEP1Q15276 862 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 ISXQ2M1V0 245 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 CD300EQ496F6 205 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-222ENST00000544585 RAB41Q5JT25 222 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 FAM46CQ5VWP2 391 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 METRNLQ641Q3 311 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 B4GALNT4Q76KP1 1039 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 TMPRSS9Q7Z410 1059 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 NELFCDQ8IXH7 590 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 ARL14Q8N4G2 192 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 C11orf44Q8N8P7 122 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 FAM71DQ8N9W8 422 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 IQUBQ8NA54 791 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 MIEF2Q96C03 454 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 ZSWIM1Q9BR11 485 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 MECRQ9BV79 373 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 LRRC4Q9HBW1 653 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 ASCL3Q9NQ33 180 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 SMYD2Q9NRG4 433 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 NCKIPSDQ9NZQ3 722 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 STEAP1Q9UHE8 339 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 ERVW-1Q9UQF0 538 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 CKAP5Q14008 2032 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 KALRNO60229 2985 aa6.14□□□□□ -1.43
CPSF7-222ENST00000544585 MYLKQ15746 1914 aa6.13□□□□□ -1.43
CPSF7-222ENST00000544585 DIRC3C9JPN6 131 aa6.13□□□□□ -1.43
CPSF7-222ENST00000544585 SCAMP1O15126 338 aa6.13□□□□□ -1.43
CPSF7-222ENST00000544585 GUCY1B2O75343 617 aa6.13□□□□□ -1.43
CPSF7-222ENST00000544585 CSO75390 466 aaKnown RBP6.13□□□□□ -1.43
CPSF7-222ENST00000544585 IL1BP01584 269 aa6.13□□□□□ -1.43
CPSF7-222ENST00000544585 HLA-DRAP01903 254 aa6.13□□□□□ -1.43
CPSF7-222ENST00000544585 CD70P32970 193 aa6.13□□□□□ -1.43
CPSF7-222ENST00000544585 HTR7P34969 479 aa6.13□□□□□ -1.43
CPSF7-222ENST00000544585 CSKP41240 450 aa6.13□□□□□ -1.43
CPSF7-222ENST00000544585 STAT1P42224 750 aa6.13□□□□□ -1.43
CPSF7-222ENST00000544585 IRAK1P51617 712 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms