RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 PPP3R2Q96LZ3 170 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 SLC12A9Q9BXP2 914 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 EBF3Q9H4W6 596 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 KLQ9UEF7 1012 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 TRPS1Q9UHF7 1281 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 FAM234BA2RU67 622 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 KPNA3O00505 521 aaPredicted RBP16.71■□□□□ 0.27
PTPRO-209ENST00000543886 FFAR3O14843 346 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 GPR42O15529 346 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 RGS14O43566 566 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 NFYCQ13952 458 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 ACOX1Q15067 660 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 AP5B1Q2VPB7 878 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 GRAMD1BQ3KR37 738 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 FNDC3BQ53EP0 1204 aaKnown RBP16.71■□□□□ 0.27
PTPRO-209ENST00000543886 RARS2Q5T160 578 aaKnown RBP16.71■□□□□ 0.27
PTPRO-209ENST00000543886 SERPINA13PQ6UXR4 307 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 HOMEZQ8IX15 550 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 NPAS3Q8IXF0 933 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 VPS33AQ96AX1 596 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 LRCH3Q96II8 777 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 ZFYVE19Q96K21 471 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 NTMT1Q9BV86 223 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 SLC32A1Q9H598 525 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 SFXN1Q9H9B4 322 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 SLC52A3Q9NQ40 469 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 FADS2P1A8MWK0 482 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 SLC28A1O00337 649 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 QSOX1O00391 747 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 SLC16A5O15375 505 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 PEX1O43933 1283 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 EEDO75530 441 aaKnown RBP16.71■□□□□ 0.27
PTPRO-209ENST00000543886 WDR47O94967 919 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 PRNPP04156 253 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 CYP2A7P20853 494 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 NRIP1P48552 1158 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 ERVK-21P61565 698 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 ADGRE1Q14246 886 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 CAPRIN1Q14444 709 aaKnown RBP16.71■□□□□ 0.27
PTPRO-209ENST00000543886 HABP4Q5JVS0 413 aaKnown RBP16.71■□□□□ 0.27
PTPRO-209ENST00000543886 PARS2Q7L3T8 475 aaKnown RBP16.71■□□□□ 0.27
PTPRO-209ENST00000543886 LRRC70Q7Z2Q7 622 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 TMEM126BQ8IUX1 230 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 VRK3Q8IV63 474 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 APLFQ8IW19 511 aaPredicted RBP16.71■□□□□ 0.27
PTPRO-209ENST00000543886 ETFBKMTQ8IXQ9 262 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 ASB11Q8WXH4 323 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 SMARCD2Q92925 531 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 NXPE3Q969Y0 559 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 ASB16Q96NS5 453 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 SLC24A3Q9HC58 644 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 ABCD2Q9UBJ2 740 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 LEF1Q9UJU2 399 aaPredicted RBP16.71■□□□□ 0.27
PTPRO-209ENST00000543886 RNF11Q9Y3C5 154 aa16.71■□□□□ 0.27
PTPRO-209ENST00000543886 A6NHS1 94 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 LOC730098B7Z3J9 87 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 FXYD1O00168 92 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 NME4O00746 187 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 ULK1O75385 1050 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 C8BP07358 591 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 FSHRP23945 695 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 HNMTP50135 292 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 MRPS35P82673 323 aaKnown RBP16.7■□□□□ 0.26
PTPRO-209ENST00000543886 PRKG2Q13237 762 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 TIGD2Q4W5G0 525 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 LDLRAP1Q5SW96 308 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 OGFRL1Q5TC84 451 aaPredicted RBP16.7■□□□□ 0.26
PTPRO-209ENST00000543886 TECPR1Q7Z6L1 1165 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 DHFR2Q86XF0 187 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 BTN2A2Q8WVV5 523 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 ASZ1Q8WWH4 475 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 SLC29A3Q9BZD2 475 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 ACTR8Q9H981 624 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 COPS7BQ9H9Q2 264 aaPredicted RBP16.7■□□□□ 0.26
PTPRO-209ENST00000543886 CERS4Q9HA82 394 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 DEC1Q9P2X7 70 aa16.7■□□□□ 0.26
PTPRO-209ENST00000543886 POLR3HQ9Y535 204 aaPredicted RBP16.7■□□□□ 0.26
PTPRO-209ENST00000543886 PRRC2BQ5JSZ5 2229 aaKnown RBP16.7■□□□□ 0.26
PTPRO-209ENST00000543886 PRSS51A0A1B0GVH4 220 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 OR2AG2A6NM03 316 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 CLDN9O95484 217 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 GGT5P36269 586 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 CASP2P42575 452 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 ZFP36L2P47974 494 aaKnown RBP16.69■□□□□ 0.26
PTPRO-209ENST00000543886 SLC6A11P48066 632 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 GRIN2CQ14957 1233 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 DUSP6Q16828 381 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 IMPG1Q17R60 797 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 SFT2D3Q587I9 215 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 C6orf10Q5SRN2 563 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 IL23RQ5VWK5 629 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 CYP20A1Q6UW02 462 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 LIPIQ6XZB0 460 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 RNF165Q6ZSG1 346 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 NEK10Q6ZWH5 1172 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 RAVER1Q8IY67 606 aaKnown RBP16.69■□□□□ 0.26
PTPRO-209ENST00000543886 BEND7Q8N7W2 519 aaPredicted RBP16.69■□□□□ 0.26
PTPRO-209ENST00000543886 AP2M1Q96CW1 435 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 VPS35Q96QK1 796 aa16.69■□□□□ 0.26
PTPRO-209ENST00000543886 WRAP53Q9BUR4 548 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms