RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SNX15Q9NRS6 342 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 ZNF212Q9UDV6 495 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 NENFQ9UMX5 172 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 DOCK2Q92608 1830 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L3A6NCW0 530 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L4A6NCW7 530 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 MFSD2BA6NFX1 497 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 BTN3A3O00478 584 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 COCHO43405 550 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 TBX10O75333 385 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 SLC22A3O75751 556 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 HOXB8P17481 243 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 FPR3P25089 353 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 GRK4P32298 578 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 TRAF2Q12933 501 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 BAATQ14032 418 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 IL17AQ16552 155 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 RFWD3Q6PCD5 774 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L2Q6R6M4 530 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 GK5Q6ZS86 529 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L1Q7RTZ2 530 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 ZBTB33Q86T24 672 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 CCDC71Q8IV32 467 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 C19orf18Q8NEA5 215 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 OR2L3Q8NG85 312 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 BPIFB1Q8TDL5 484 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 CNBD2Q96M20 576 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 ZCCHC3Q9NUD5 404 aaKnown RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 ZNHIT2Q9UHR6 403 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 FOXD3Q9UJU5 478 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-212ENST00000543766 IRAK3Q9Y616 596 aa8.76□□□□□ -1.01
VPS13D-212ENST00000543766 RTL9Q8NET4 1388 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 ABCB11O95342 1321 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 M0QYV0 167 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 ARPC5O15511 151 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 NPHS1O60500 1241 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 PRKD3O94806 890 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 HCKP08631 526 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 GAAP10253 952 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 CYP2C18P33260 490 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 RBM34P42696 430 aaKnown RBP8.75□□□□□ -1.01
VPS13D-212ENST00000543766 CDKN2CP42773 168 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 CDH6P55285 790 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 FCGRTP55899 365 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 GCKRQ14397 625 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 LRRC73Q5JTD7 316 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 B3GNT9Q6UX72 402 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 DTHD1Q6ZMT9 781 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 SLC13A5Q86YT5 568 aaPredicted RBP8.75□□□□□ -1.01
VPS13D-212ENST00000543766 ARMC8Q8IUR7 673 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 OR5M1Q8NGP8 315 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 PCED1AQ9H1Q7 454 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 KCNH6Q9H252 994 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 LRRC4Q9HBW1 653 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 PLSCR3Q9NRY6 295 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 TRPC4Q9UBN4 977 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 KIAA1551Q9HCM1 1747 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 NRCAMQ92823 1304 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 EFSO43281 561 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 RSL1D1O76021 490 aaKnown RBP8.75□□□□□ -1.01
VPS13D-212ENST00000543766 PDE9AO76083 593 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 ABLIM3O94929 683 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 CHRNGP07510 517 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 CD19P15391 556 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 KLRC1P26715 233 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 GRK6P43250 576 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 PMP22Q01453 160 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 CLN3Q13286 438 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 ORC1Q13415 861 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 CTXN3Q4LDR2 81 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 ACSBG2Q5FVE4 666 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 PRAMEF13Q5VWM6 474 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 DEFB132Q7Z7B7 95 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 METTL25Q8N6Q8 603 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 FNDC5Q8NAU1 212 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 DENND6BQ8NEG7 585 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 C16orf78Q8WTQ4 265 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 ROBO4Q8WZ75 1007 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 NGBQ9NPG2 151 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 SLAMF7Q9NQ25 335 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 GOLT1BQ9Y3E0 138 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 TMEM191CA6NGB0 347 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 OIP5O43482 229 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 SOX15O60248 233 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 PAPLNO95428 1278 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 ANXA1P04083 346 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 GP1BAP07359 652 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 TMEM191BP0C7N4 346 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 PTPN1P18031 435 aaKnown RBP8.75□□□□□ -1.01
VPS13D-212ENST00000543766 SFNP31947 248 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 DNA2P51530 1060 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 CASP7P55210 303 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 CABP4P57796 275 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 YWHAZP63104 245 aaKnown RBP8.75□□□□□ -1.01
VPS13D-212ENST00000543766 IL18R1Q13478 541 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 MPP2Q14168 576 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 SLC9C1Q4G0N8 1177 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 ATP13A5Q4VNC0 1218 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 GPR107Q5VW38 600 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 DPY19L3Q6ZPD9 716 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms