RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 MILR1Q7Z6M3 343 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 ARL10Q8N8L6 244 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 FAR1Q8WVX9 515 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 FBXO32Q969P5 355 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 VMP1Q96GC9 406 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 PPP3R2Q96LZ3 170 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 SPON2Q9BUD6 331 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 PCDHB8Q9UN66 801 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 INVSQ9Y283 1065 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 PLXNA3P51805 1871 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 BCKDKO14874 412 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 JRKO75564 520 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 ANGPTL1O95841 491 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 CCDC159P0C7I6 412 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 FSHRP23945 695 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 ALDH4A1P30038 563 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 PIK3CGP48736 1102 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 VAC14Q08AM6 782 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 ALG1LQ6GMV1 187 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 DCP2Q8IU60 420 aaKnown RBP12.7□□□□□ -0.38
DDX11-223ENST00000542838 MICU2Q8IYU8 434 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 PHACTR4Q8IZ21 702 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 EFHBQ8N7U6 833 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 MCOLN3Q8TDD5 553 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 RORBQ92753 470 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 SLC35B4Q969S0 331 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 RHBDF1Q96CC6 855 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 UROC1Q96N76 676 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 HEPHQ9BQS7 1158 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 DPY30Q9C005 99 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 IPPKQ9H8X2 491 aa12.7□□□□□ -0.38
DDX11-223ENST00000542838 EIF3LQ9Y262 564 aaKnown RBP12.7□□□□□ -0.38
DDX11-223ENST00000542838 TNPO3Q9Y5L0 923 aaKnown RBP12.7□□□□□ -0.38
DDX11-223ENST00000542838 GABARAPO95166 117 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 NADKO95544 446 aaPredicted RBP12.69□□□□□ -0.38
DDX11-223ENST00000542838 FTH1P02794 183 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 S100BP04271 92 aaPredicted RBP12.69□□□□□ -0.38
DDX11-223ENST00000542838 PFKLP17858 780 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 TACR2P21452 398 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 RYKP34925 604 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 PCBP2Q15366 365 aaKnown RBP eCLIP12.69□□□□□ -0.38
DDX11-223ENST00000542838 INAQ16352 499 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 PAGE2BQ5JRK9 111 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 NADSYN1Q6IA69 706 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 GCNT7Q6ZNI0 430 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 TAS2R42Q7RTR8 314 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 LGI2Q8N0V4 545 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 PIK3C3Q8NEB9 887 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 NDNFQ8TB73 568 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 KCNJ9Q92806 393 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 B3GALT6Q96L58 329 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 C8orf48Q96LL4 319 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 PARK7Q99497 189 aaKnown RBP12.69□□□□□ -0.38
DDX11-223ENST00000542838 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.69□□□□□ -0.38
DDX11-223ENST00000542838 SLC25A37Q9NYZ2 338 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 MYADML2A6NDP7 307 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 SLC22A1O15245 554 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 INSIG1O15503 277 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 KDM1AO60341 852 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 CREG1O75629 220 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 OTCP00480 354 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 HOXD9P28356 352 aaPredicted RBP12.69□□□□□ -0.38
DDX11-223ENST00000542838 IFITM3Q01628 133 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 RAPSNQ13702 412 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 DGUOKQ16854 277 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 ADPRMQ3LIE5 342 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 GTDC1Q4AE62 458 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 GREB1Q4ZG55 1949 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 SPANXN4Q5MJ08 99 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 ADCK1Q86TW2 530 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 MSRB3Q8IXL7 192 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 CADM3Q8N126 398 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 ZCCHC7Q8N3Z6 543 aaKnown RBP12.69□□□□□ -0.38
DDX11-223ENST00000542838 ITCHQ96J02 903 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 ZNF641Q96N77 438 aaPredicted RBP12.69□□□□□ -0.38
DDX11-223ENST00000542838 TRPM7Q96QT4 1865 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 ATP13A3Q9H7F0 1226 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 ZFP14Q9HCL3 533 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 DCAF13Q9NV06 445 aaKnown RBP12.69□□□□□ -0.38
DDX11-223ENST00000542838 ERVK-18Q9QC07 812 aa12.69□□□□□ -0.38
DDX11-223ENST00000542838 TMEFF2Q9UIK5 374 aaPredicted RBP12.69□□□□□ -0.38
DDX11-223ENST00000542838 A0A0U1RQF3 1178 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 A0A0U1RQS6 177 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 FFAR3O14843 346 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 STX7O15400 261 aaKnown RBP12.68□□□□□ -0.38
DDX11-223ENST00000542838 SLC16A6O15403 523 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 GPR42O15529 346 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 AQP9O43315 295 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 GUCA1CO95843 209 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 SERPINA1P01009 418 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 PRLP01236 227 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 CD9P21926 228 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 PAX3P23760 479 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 FMO3P31513 532 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 GGT5P36269 586 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 MAP2K4P45985 399 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 CLCN4P51793 760 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 IL1RL1Q01638 556 aa12.68□□□□□ -0.38
DDX11-223ENST00000542838 RUNDC3AQ59EK9 446 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms