RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 GABRB3P28472 473 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 PPM1FP49593 454 aaPredicted RBP9.47□□□□□ -0.89
YBX3-212ENST00000542002 SEPHS1P49903 392 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 SH3BP2P78314 561 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 TIAL1Q01085 375 aaKnown RBP eCLIP9.47□□□□□ -0.89
YBX3-212ENST00000542002 GSTM4Q03013 218 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 HSPA14Q0VDF9 509 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 ABRQ12979 859 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 MORF4L2Q15014 288 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 TGIF1Q15583 401 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 BBS9Q3SYG4 887 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 HSP90AA5PQ58FG0 334 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 AARS2Q5JTZ9 985 aaKnown RBP9.47□□□□□ -0.89
YBX3-212ENST00000542002 ARMC3Q5W041 872 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 MRNIPQ6NTE8 343 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 FBXO38Q6PIJ6 1188 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 ZNF572Q7Z3I7 529 aaPredicted RBP9.47□□□□□ -0.89
YBX3-212ENST00000542002 PCGF5Q86SE9 256 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 SDCCAG8Q86SQ7 713 aaPredicted RBP9.47□□□□□ -0.89
YBX3-212ENST00000542002 ZFAND4Q86XD8 727 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 PLXDC1Q8IUK5 500 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 SLC22A15Q8IZD6 547 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 AGBL5Q8NDL9 886 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 OR52E1Q8NGJ3 308 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 KLHL6Q8WZ60 621 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 ART4Q93070 314 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 TMEM159Q96B96 161 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 FAM136AQ96C01 138 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 RNF31Q96EP0 1072 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 SLC30A3Q99726 388 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 CTRCQ99895 268 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 SPRY4Q9C004 299 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 RAB33BQ9H082 229 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 EPB41L1Q9H4G0 881 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 VPS37BQ9H9H4 285 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 FBXO6Q9NRD1 293 aaPredicted RBP9.47□□□□□ -0.89
YBX3-212ENST00000542002 THSD1Q9NS62 852 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 C20orf96Q9NUD7 363 aaPredicted RBP9.47□□□□□ -0.89
YBX3-212ENST00000542002 HRASLS2Q9NWW9 162 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 SAMD15Q9P1V8 674 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 SEMA5BQ9P283 1151 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 PCDHGA7Q9Y5G6 932 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 B3GALT1Q9Y5Z6 326 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 TEX264Q9Y6I9 313 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 COLEC10Q9Y6Z7 277 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 KIF26BQ2KJY2 2108 aa9.47□□□□□ -0.89
YBX3-212ENST00000542002 ZFC3H1O60293 1989 aaKnown RBP9.46□□□□□ -0.89
YBX3-212ENST00000542002 UBA6A0AVT1 1052 aaPredicted RBP9.46□□□□□ -0.9
YBX3-212ENST00000542002 EFCAB8A8MWE9 144 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 B4E171 279 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 QSOX1O00391 747 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 IFRD1O00458 451 aaPredicted RBP9.46□□□□□ -0.9
YBX3-212ENST00000542002 ANKRD34CP0C6C1 535 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 POLR2CP19387 275 aaPredicted RBP9.46□□□□□ -0.9
YBX3-212ENST00000542002 CSTF2P33240 577 aaKnown RBP eCLIP9.46□□□□□ -0.9
YBX3-212ENST00000542002 PPARGP37231 505 aaPredicted RBP9.46□□□□□ -0.9
YBX3-212ENST00000542002 TSPAN7P41732 249 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 ELK3P41970 407 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 SLC1A2P43004 574 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 KPNA2P52292 529 aaKnown RBP9.46□□□□□ -0.9
YBX3-212ENST00000542002 ADARP55265 1226 aaKnown RBP9.46□□□□□ -0.9
YBX3-212ENST00000542002 EIF3BP55884 814 aaKnown RBP9.46□□□□□ -0.9
YBX3-212ENST00000542002 MPP1Q00013 466 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 MC2RQ01718 297 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 TLE3Q04726 772 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 SRSF6Q13247 344 aaKnown RBP9.46□□□□□ -0.9
YBX3-212ENST00000542002 CLN3Q13286 438 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 GRB7Q14451 532 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 KRT33BQ14525 404 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 KCNAB1Q14722 419 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 CRYMQ14894 314 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 FASTKD3Q14CZ7 662 aaKnown RBP9.46□□□□□ -0.9
YBX3-212ENST00000542002 PLCL1Q15111 1095 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 LONRF1Q17RB8 773 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 COL28A1Q2UY09 1125 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 CCSMST1Q4G0I0 132 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 CACHD1Q5VU97 1274 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 ANKS6Q68DC2 871 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 DUPD1Q68J44 220 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 ZNF470Q6ECI4 717 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 PTRHD1Q6GMV3 140 aaKnown RBP9.46□□□□□ -0.9
YBX3-212ENST00000542002 IRGCQ6NXR0 463 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 CNSTQ6PJW8 725 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 FAM129CQ86XR2 697 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 SPACA3Q8IXA5 215 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 ADGRF3Q8IZF5 1079 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 OTUD6BQ8N6M0 293 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 ACVR1CQ8NER5 493 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 LCN9Q8WX39 176 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 ZDHHC12Q96GR4 267 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 SNF8Q96H20 258 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 RUNDC3BQ96NL0 473 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 TCF12Q99081 682 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 MAP3K3Q99759 626 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 ERP44Q9BS26 406 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 HGH1Q9BTY7 390 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 MENTQ9BUN1 341 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 TWSG1Q9GZX9 223 aa9.46□□□□□ -0.9
YBX3-212ENST00000542002 ZNF768Q9H5H4 540 aaKnown RBP9.46□□□□□ -0.9
YBX3-212ENST00000542002 TFB2MQ9H5Q4 396 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms