RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 GHITMQ9H3K2 345 aa3.71□□□□□ -1.82
KNTC1-211ENST00000541427 TBC1D22BQ9NU19 505 aa3.71□□□□□ -1.82
KNTC1-211ENST00000541427 TMEM94Q12767 1356 aa3.71□□□□□ -1.82
KNTC1-211ENST00000541427 KIAA0232Q92628 1395 aa3.71□□□□□ -1.82
KNTC1-211ENST00000541427 GREB1LQ9C091 1923 aaPredicted RBP3.71□□□□□ -1.82
KNTC1-211ENST00000541427 KDM3BQ7LBC6 1761 aa3.71□□□□□ -1.82
KNTC1-211ENST00000541427 MAPK8IP3Q9UPT6 1336 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 PKD1L3Q7Z443 1732 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 PARP4Q9UKK3 1724 aaKnown RBP3.7□□□□□ -1.82
KNTC1-211ENST00000541427 A0A0B4J293 547 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 FAM172BPA6NC97 362 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 A6NCN8 305 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 TMEM189-UBE2V1I3L0A0 370 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 J3QR06 171 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 GPC4O75487 556 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 GJB3O75712 270 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 IGHV4-39P01824 125 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 ATP1A1P05023 1023 aaKnown RBP3.7□□□□□ -1.82
KNTC1-211ENST00000541427 TUBBP07437 444 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 HOXD13P35453 343 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 EIF5P55010 431 aaKnown RBP3.7□□□□□ -1.82
KNTC1-211ENST00000541427 RIPK4P57078 832 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 LMOD3Q0VAK6 560 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 UBE2V1Q13404 147 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 RRS1Q15050 365 aaKnown RBP3.7□□□□□ -1.82
KNTC1-211ENST00000541427 ALDH1L2Q3SY69 923 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 ACCSLQ4AC99 568 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 PDSS1Q5T2R2 415 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 C20orf194Q5TEA3 1177 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 C19orf48Q6RUI8 117 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 PLXDC2Q6UX71 529 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 TPRG1Q6ZUI0 275 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 PIWIL4Q7Z3Z4 852 aaKnown RBP3.7□□□□□ -1.82
KNTC1-211ENST00000541427 SZRD1Q7Z422 152 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 GALNT13Q8IUC8 556 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 DCUN1D3Q8IWE4 304 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.7□□□□□ -1.82
KNTC1-211ENST00000541427 DMBX1Q8NFW5 382 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 FAM120BQ96EK7 910 aaKnown RBP3.7□□□□□ -1.82
KNTC1-211ENST00000541427 OXNAD1Q96HP4 312 aaPredicted RBP3.7□□□□□ -1.82
KNTC1-211ENST00000541427 FKRPQ9H9S5 495 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 POLG2Q9UHN1 485 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 DBNLQ9UJU6 430 aaKnown RBP3.7□□□□□ -1.82
KNTC1-211ENST00000541427 FAF1Q9UNN5 650 aaPredicted RBP3.7□□□□□ -1.82
KNTC1-211ENST00000541427 LAS1LQ9Y4W2 734 aaKnown RBP3.7□□□□□ -1.82
KNTC1-211ENST00000541427 MSH6P52701 1360 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 SIPA1L3O60292 1781 aaPredicted RBP3.7□□□□□ -1.82
KNTC1-211ENST00000541427 RGS12O14924 1447 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 TNS3Q68CZ2 1445 aa3.7□□□□□ -1.82
KNTC1-211ENST00000541427 GLI3P10071 1580 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 MRC1P22897 1456 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 CPDO75976 1380 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 CEMIPQ8WUJ3 1361 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 OR2M5A3KFT3 312 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 PLK4O00444 970 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 GRID2O43424 1007 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 HTATSF1O43719 755 aaKnown RBP3.69□□□□□ -1.82
KNTC1-211ENST00000541427 SYNGR3O43761 229 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 FGF17O60258 216 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 TMCC2O75069 709 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 HOXA1P49639 335 aaPredicted RBP3.69□□□□□ -1.82
KNTC1-211ENST00000541427 SUOXP51687 545 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 CTSCP53634 463 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 CD81P60033 236 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 PPP2R2BQ00005 443 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 MC1RQ01726 317 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 CREB5Q02930 508 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 CALD1Q05682 793 aaKnown RBP3.69□□□□□ -1.82
KNTC1-211ENST00000541427 AIMP2Q13155 320 aaKnown RBP3.69□□□□□ -1.82
KNTC1-211ENST00000541427 DLG2Q15700 870 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 MEA1Q16626 185 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 DUSP28Q4G0W2 176 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 PLEKHM3Q6ZWE6 761 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 GBGT1Q8N5D6 347 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 METTL27Q8N6F8 245 aaPredicted RBP3.69□□□□□ -1.82
KNTC1-211ENST00000541427 C1orf52Q8N6N3 182 aaKnown RBP3.69□□□□□ -1.82
KNTC1-211ENST00000541427 UHRF2Q96PU4 802 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 DDOQ99489 341 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 HGH1Q9BTY7 390 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 C1QTNF1Q9BXJ1 281 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 RAD21L1Q9H4I0 556 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 SMARCAD1Q9H4L7 1026 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 SYNCQ9H7C4 482 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 DNAJC18Q9H819 358 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 TRPC7Q9HCX4 862 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 ZNF334Q9HCZ1 680 aaPredicted RBP3.69□□□□□ -1.82
KNTC1-211ENST00000541427 MBNL1Q9NR56 388 aaKnown RBP3.69□□□□□ -1.82
KNTC1-211ENST00000541427 RCC2Q9P258 522 aaKnown RBP3.69□□□□□ -1.82
KNTC1-211ENST00000541427 TBC1D29Q9UFV1 150 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 PNMA2Q9UL42 364 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 VIRMAQ69YN4 1812 aaKnown RBP3.69□□□□□ -1.82
KNTC1-211ENST00000541427 COL22A1Q8NFW1 1626 aaPredicted RBP3.69□□□□□ -1.82
KNTC1-211ENST00000541427 KIF16BQ96L93 1317 aa3.69□□□□□ -1.82
KNTC1-211ENST00000541427 RGPD2P0DJD1 1756 aa3.68□□□□□ -1.82
KNTC1-211ENST00000541427 ANKRD66B4E2M5 251 aa3.68□□□□□ -1.82
KNTC1-211ENST00000541427 DVL1O14640 695 aa3.68□□□□□ -1.82
KNTC1-211ENST00000541427 ZBTB43O43298 467 aa3.68□□□□□ -1.82
KNTC1-211ENST00000541427 CTSVO60911 334 aa3.68□□□□□ -1.82
KNTC1-211ENST00000541427 SLC22A3O75751 556 aa3.68□□□□□ -1.82
KNTC1-211ENST00000541427 GCNT3O95395 438 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms