RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ATE1O95260 518 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 SBK3P0C264 359 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 THRBP10828 461 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 CKMT2P17540 419 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 NMBRP28336 390 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 GABRR2P28476 465 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 RYKP34925 604 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 CXCL12P48061 93 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 RXRGP48443 463 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 CCR3P51677 355 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 NEK2P51955 445 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 MAD2L1Q13257 205 aaPredicted RBP10.24□□□□□ -0.77
CHFR-219ENST00000541341 ITGADQ13349 1161 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 NFYCQ13952 458 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 ZNF678Q5SXM1 525 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 CERCAMQ5T4B2 595 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 C1QTNF12Q5T7M4 302 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 GPR158Q5T848 1215 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 TMEM198Q66K66 360 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 CYP2R1Q6VVX0 501 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 FAM35AQ86V20 835 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 TMC8Q8IU68 726 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 SLC41A1Q8IVJ1 513 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 MFSD6LQ8IWD5 586 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 SLC15A3Q8IY34 581 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 ATPAF2Q8N5M1 289 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 TXNDC5Q8NBS9 432 aaKnown RBP10.24□□□□□ -0.77
CHFR-219ENST00000541341 SLC2A14Q8TDB8 520 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 RASSF5Q8WWW0 418 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 SMARCD1Q96GM5 515 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 ATXN7L3BQ96GX2 97 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 IL12RB2Q99665 862 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 SEPT5Q99719 369 aaPredicted RBP10.24□□□□□ -0.77
CHFR-219ENST00000541341 NEURL2Q9BR09 285 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 CEP44Q9C0F1 390 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 SMOC1Q9H4F8 434 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 WDCPQ9H6R7 721 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 MAGIXQ9H6Y5 334 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 GLOD4Q9HC38 313 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 DNAJB9Q9UBS3 223 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 POLG2Q9UHN1 485 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 PACSIN3Q9UKS6 424 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 BAG5Q9UL15 447 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 OAZ3Q9UMX2 235 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 CDC14AQ9UNH5 594 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 PDE10AQ9Y233 779 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 PCDHA9Q9Y5H5 950 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 CPQQ9Y646 472 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 AP1M2Q9Y6Q5 423 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 A0A1W2PPW3 197 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 FAM234BA2RU67 622 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 ARNTLO00327 626 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 AXIN1O15169 862 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 CD3EAPO15446 510 aaKnown RBP10.23□□□□□ -0.77
CHFR-219ENST00000541341 MAP3K6O95382 1288 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 PRAMEF12O95522 483 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 HAPLN1P10915 354 aaPredicted RBP10.23□□□□□ -0.77
CHFR-219ENST00000541341 MSH3P20585 1137 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 SAT1P21673 171 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 SLC6A2P23975 617 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 GLRBP48167 497 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 ARCN1P48444 511 aaKnown RBP10.23□□□□□ -0.77
CHFR-219ENST00000541341 RENBPP51606 427 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 EPHB3P54753 998 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 DEFA1P59665 94 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 DEFA3P59666 94 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.23□□□□□ -0.77
CHFR-219ENST00000541341 PRKG2Q13237 762 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 PLD1Q13393 1074 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 GEN1Q17RS7 908 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 ZNF181Q2M3W8 571 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 PLEKHG6Q3KR16 790 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 NANOGP8Q6NSW7 305 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 MRNIPQ6NTE8 343 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 TMEM53Q6P2H8 277 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 CRTC3Q6UUV7 619 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 CES3Q6UWW8 571 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 ATG14Q6ZNE5 492 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 CLEC20AQ6ZU45 233 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 GAREM2Q75VX8 874 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 CEP68Q76N32 757 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 PRSS48Q7RTY5 328 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 HIPK1Q86Z02 1210 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 SPPL2CQ8IUH8 684 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 SPATA2LQ8IUW3 424 aaPredicted RBP10.23□□□□□ -0.77
CHFR-219ENST00000541341 HID1Q8IV36 788 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 CLEC4FQ8N1N0 589 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 DPP10Q8N608 796 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 GALNT6Q8NCL4 622 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 OR7A2PQ8NGA2 310 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 OR8J3Q8NGG0 315 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 STAG3L4Q8TBR4 150 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 MAGEE2Q8TD90 523 aaPredicted RBP10.23□□□□□ -0.77
CHFR-219ENST00000541341 PHF10Q8WUB8 498 aaKnown RBP10.23□□□□□ -0.77
CHFR-219ENST00000541341 CHAC2Q8WUX2 184 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 SH3YL1Q96HL8 342 aaPredicted RBP10.23□□□□□ -0.77
CHFR-219ENST00000541341 C8orf48Q96LL4 319 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 CCDC115Q96NT0 180 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 ZBTB18Q99592 522 aa10.23□□□□□ -0.77
CHFR-219ENST00000541341 ASPSCR1Q9BZE9 553 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms